Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02278 ATGTTTCTGAAATGGTTTGGCGACAATAAAAGTTCATCTGATAGAGGGTATCCAACTGTAATACAAGAGCTGTGTCGTCAATTCTCTTGGACTGATATTAAGAAAGTAACTAACAACTTTGATGAAAAGAGAATAATTGGAGATGGAGAATTTAGTAAAGCATATAAAGGTTATCTTAAACGCAATGATGGTACTGATTATGCAGTTGCAGTGAAGCGATTTAAAGTGGAACGCCCTGATGGATGGGGAGAGTTCACGACTGAGGTAGAGTTGCACTGCCAGCTTCATCACCCTCATATAATCTCTCTTATAGGATTCTGCATCCACAAAAAAGAAAAGATTATCGTGTTCGAGTACATGCCCAATGGATCTCTACATGGACACCTGCAAGGTGGGAAACTGTCATGGAAGAAAAGGCTAGAGATTTGCATAGGAGCAGCACGTGGACTACACTACCTTCACGCAGGAGCAAAGCGCACCATCATTCATCGTCACATCAAACCTAGCTACATTCTTTTGGACCACAACATGAACCCAAAACTCGTAGGTTTTGGCCTTAGCATACAAGGAGCACGTTTTATGTCAAAGCCTAAACCAATTAAAATAAATACTCCTGGATATATTAGGGGTACTTTGGGGTACATAGCACCGGAGTATTACAAGGACAGTACCGTGACAGATAGATGTGATGTTTTCTCATTTGGTGTGGTTCTACTAGAAGTTGTTTGGGGAAGAAGATTTTTCGACATGATAAAAAGGGGATATTTTCTGGAGAAGCCCGTTGAGGAGGATATTGATCCGAATATAAAAGGAAAGATTGCACCAGAGTGTTGGCAAGTCTTTATAGATGTCACCCTAAGATGCTTGAATGAAGCAGATGAGAGACCGTCAATGGGTGAAGTAGAGGTGGAACTTGAGCATGCTCTGTCTTTGCAGGAACAAGCAGATATCACAAACACCGATGGTGTTTATACCTTACATTCCACCACCATTATTCCCAGGGAAGACAGACCGGGATGGAACTCTCACATACATTATATGCAGCGACGCTTGTTACAATAG 1062 0.4153 MFLKWFGDNKSSSDRGYPTVIQELCRQFSWTDIKKVTNNFDEKRIIGDGEFSKAYKGYLKRNDGTDYAVAVKRFKVERPDGWGEFTTEVELHCQLHHPHIISLIGFCIHKKEKIIVFEYMPNGSLHGHLQGGKLSWKKRLEICIGAARGLHYLHAGAKRTIIHRHIKPSYILLDHNMNPKLVGFGLSIQGARFMSKPKPIKINTPGYIRGTLGYIAPEYYKDSTVTDRCDVFSFGVVLLEVVWGRRFFDMIKRGYFLEKPVEEDIDPNIKGKIAPECWQVFIDVTLRCLNEADERPSMGEVEVELEHALSLQEQADITNTDGVYTLHSTTIIPREDRPGWNSHIHYMQRRLLQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02278 353 SUPERFAMILY Protein kinase-like (PK-like) 13 304 IPR011009 -
Cca07g02278 353 Gene3D Transferase(Phosphotransferase) domain 1 120 330 - -
Cca07g02278 353 PANTHER TYROSINE KINASE FAMILY PROTEIN 11 328 - -
Cca07g02278 353 ProSiteProfiles Protein kinase domain profile. 40 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02278 353 PANTHER OS07G0166700 PROTEIN 11 328 IPR045272 GO:0004714|GO:0006468
Cca07g02278 353 ProSitePatterns Protein kinases ATP-binding region signature. 46 72 IPR017441 GO:0005524
Cca07g02278 353 Gene3D Phosphorylase Kinase; domain 1 6 119 - -
Cca07g02278 353 Pfam Protein kinase domain 41 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02278 Cca-Chr7 51266387 51283390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02278 7 316 Receptor kinase-like Gene Family AT3G51550 41.718 2.55e-74 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Cca07g02278 Pkinase 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02278 - - gmx:100812131 425.631