Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02277 ATGTTTCTCAAATGCTTTGGCCACACAAGTTCATCTCAAAGACGGTATCCAACGATAATACAAGAGCTCTGCCATCAATTTTCTTTGTCTGATCTCAGGAAATCAACCAACAATTTTGACGAAGAGAGAGTAATTGGACGTGGAGCATTTAGTATAATATATAAAGGTTGCCTCCAACGTGATGACGCTTCTGATTATCTGGTCGCAGTGAAGCGATTTAAAGAGGAAAACAGTACAGTGTTCAAGACTGAAATAGAGTTGCTCTGCCAGCTTCGTCACCCTAATATTGTCTCTCTTATAGGATTCTGCAACCATGAAAATGACAAGATTATTGTGTATGAGTACATGTCCAACGGATCTCTCTATGAATGCCTAGAGCGTGGGAAACTGACATGGAAGAAAAGGGTAGAGATCTTCATTGGAGCAGCGCGTGGACTACACTACCTTCACGCCGGATTAAAGCGCTCCATCTTTCACTGTATTCTCAGTCCCAGTACAATTCTTTTGGATGCCAACATGAAGCCAAAACTCGCAGGTTTCGGCCTTAGCATACAGGGAGCACGGTTTGATTCAAAGCCAAAACAAATTAATGGAGACCATATTATGGGTACTCTTGCCTACATAGCTCCGGAGCATATCAGGAAAGGTATCGTCACAGATAAATGTGATGTTTATTCATTTGGTATAGTTCTACTAGAAGTTGTGAGCGGAAGAAGACTTTTCCACCCAGTAGCCAGAGAAGATTTTCTGGAGAAGCCTTTTGAGGAGCATATTGATCCAAATATCAGAGGAAAGATTGCACCGGAGAGTTGGCAAGTCTTTATAGATATCATGGTAAGATGCTTGGAATATGAAGCTGATGAGAGACCAACAATGGGTGAAGTAGAGGTGGAACTTGAGCGTGCTTTGTCGTTACAAGAACAACAAGATATCGCAAACACCAACGGTCCTTATACCTTAATTTCTACCACCATTATTCCCTGGGATGATAGATTCTACCAATAG 1005 0.4169 MFLKCFGHTSSSQRRYPTIIQELCHQFSLSDLRKSTNNFDEERVIGRGAFSIIYKGCLQRDDASDYLVAVKRFKEENSTVFKTEIELLCQLRHPNIVSLIGFCNHENDKIIVYEYMSNGSLYECLERGKLTWKKRVEIFIGAARGLHYLHAGLKRSIFHCILSPSTILLDANMKPKLAGFGLSIQGARFDSKPKQINGDHIMGTLAYIAPEHIRKGIVTDKCDVYSFGIVLLEVVSGRRLFHPVAREDFLEKPFEEHIDPNIRGKIAPESWQVFIDIMVRCLEYEADERPTMGEVEVELERALSLQEQQDIANTNGPYTLISTTIIPWDDRFYQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02277 334 Gene3D Phosphorylase Kinase; domain 1 5 115 - -
Cca07g02277 334 ProSiteProfiles Protein kinase domain profile. 39 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02277 334 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
Cca07g02277 334 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 322 - -
Cca07g02277 334 PIRSF ILK 2 314 - -
Cca07g02277 334 Pfam Protein tyrosine and serine/threonine kinase 42 297 IPR001245 GO:0004672|GO:0006468
Cca07g02277 334 Gene3D Transferase(Phosphotransferase) domain 1 116 321 - -
Cca07g02277 334 PANTHER OS07G0166700 PROTEIN 10 322 IPR045272 GO:0004714|GO:0006468
Cca07g02277 334 SUPERFAMILY Protein kinase-like (PK-like) 13 298 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02277 Cca-Chr7 51244057 51262616 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02277 9 310 Receptor kinase-like Gene Family AT3G51550 37.618 3.28e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Cca07g02277 PK_Tyr_Ser-Thr 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02277 - - gmx:100781132 441.81