Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02274 ATGGCATCACCAACACCCCTTTTGAAAGATGAACTTGACATCGTGATCCCCACCATCAGGAACCTCGATTTCTTGGAGATGTGGAGACCCTTCTTTCAGCCTTACCATCTCATCATTGTGCAAGATGGTGACCCTTCGAAGACCATCAAGGTCCCTGAAGGCTTTGACTATGAACTCTACAACCGCAATGACATCAACAGGATTCTTGGTCCCAAGGCCAGTTGCATCTCCTTCAAGGACTCTGCATGCCGTTGCTTTGGCTACATGGTCTCCAAGAAGAAGTACATCTACACCATTGATGATGATTGCTTCGTTGCCAATGATCCATCTGGGCACAAGATTAATGCACTAGAGCAGCATATAAAAAATCTTCTCTGCCCATCCACACCCTACTTCTTCAACACCCTCTATGAACCTTACCGAGAAGGTGCAGATTTTGTTCGTGGTTACCCCTTTAGTCTCCGCGAAGGTGTACCAACTGCAGTTTCTCATGGTCTTTGGCTCAACATCCCAGACTATGATGCTCCCACTCAGCTTGTGAAGCCTCTTGAGAGGAACACCAGGTATGTAGATGCTATTTTGACCATACCAAAGGGAACTTTGTTTCCCATGTGTGGAATGAACTTGGCCTTTGATCGTGATCTCATCGGAGCAGCAATGTACTTTGGTCTCATGGGTGACGGTCAGCCTATTGGACGCTACGACGACATGTGGGCTGGTTGGTGCTGCAAGGTAATATGTGATCACTTGGGATTGGGAATCAAGACCGGTCTACCTTATATCTTTCACAGCAAGGCCAGCAACCCTTTTGTAAACCTGAGGAAAGAGTACAAAGGCATATTCTGGCAAGAAGACATTATCCCCTTCTTCCAGAGCATTATTCTTCCAAAAGAAGCTACCACTGTTCAGAAGTGCTACGTTGAGCTAGCCAAGCAAGTCAAGGAAAAGCTTTCCAAGGTAGATCCTTACTTTGACAAGTTGGCCGATGCCATGGTCACTTGGATTGAAGCTTGGGACGAGCTTAACCCTGCTGGAGCATCTGGCAAACCAAAAGCATGA 1059 0.4674 MASPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVANDPSGHKINALEQHIKNLLCPSTPYFFNTLYEPYREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAILTIPKGTLFPMCGMNLAFDRDLIGAAMYFGLMGDGQPIGRYDDMWAGWCCKVICDHLGLGIKTGLPYIFHSKASNPFVNLRKEYKGIFWQEDIIPFFQSIILPKEATTVQKCYVELAKQVKEKLSKVDPYFDKLADAMVTWIEAWDELNPAGASGKPKA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02274 352 SUPERFAMILY Nucleotide-diphospho-sugar transferases 32 242 IPR029044 -
Cca07g02274 352 PANTHER UDP-ARABINOSE MUTASE 3 347 IPR037595 -
Cca07g02274 352 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 3 347 - -
Cca07g02274 352 PIRSF UPTG 2 346 IPR004901 GO:0016866|GO:0071669
Cca07g02274 352 Pfam Reversibly glycosylated polypeptide 8 342 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02274 Cca-Chr7 51185261 51188390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02274 K13379 - gmx:100783948 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00329 09 7717171 7720455 Cca07g02274 07 51185261 51188390 PCT