Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02266 ATGGACACAACTCTCACACGAATAGCTTTAGGAACCATCCTCTTTCTCTTGTTATTGTTAAGCCACCCTTACCTTTCCATAGCAGAAGATGCTATTTATAGTCCCCTTGACCTTTTCAGCATCAACTGTGGCTCCTCCACCAACCTGTCCACGCTCGATGGTCGGAATTGGATTGGAGACATCAAATTCCTCTCACAAAGCAACGACTCAGTAGCTGCTACTCCACTCACACCATCTACACAACAGGCTCCTTACACTTCAGCTCGTCTCTCTCACTCCCAATTCACTTACTCATTCCCTGTCACCCCAGGTCCAAACTTCCTTCGCCTCTTCTTCTACTCAACTTCCTACCTTAACTTTGATCGCCCCAAAGCCTATTTCTCGGTCAAAGTAAACCAACACACCCTCCTTCAACATTTCAACGCTTCCCTCAACGCTGACGCTGATGACGACCCTCAGGACATCTTGTTCAGAGAGTATTGCATCAACCTCCAAGATGCTCATCAGAACCTCAACATAACCTTCATCCCAAGCACCACAGATTCTTACGCTTTCATCAACGGAATCGAGATTGTTTCCATGCCCCCTTATCTCTACTATACCAATTCCAACGTCGACAACCCAGGATTATTGCCGCAACTTGTTGGAGGATCAACATATACTATTGAAAACCATTCGGCTCTAGAGACTATGTACCGGTTAAACGTTGGAGGGAAAGATACCTCCCCTATAGATGACACGGGTATGCTCAGAACCTGGGATGCCGATGACCAATATGTAACTAGTCAAAGTGTACTATCTGTTGACTATGAGCAGAGAACTAAGCTGAGCTTCACTGAGACTCCTAACTACACAGCACCAGACCTAGTGTACCGATCCGTAAGGAGTATGGGAACGAATGGCTCTATCAACACGGGCTTCAACCTCACGTGGCAGCTTCCTGTTGATTACGGCTTCTTCTACTTGCTAAGGTTACACTTCTGCGAGCTTAACCCGAAGGTGCACAATCCTGGTGACCTAATCTTCTACATCTTCATCCAGGATCACTTGGTTGAAGACATGGCAGACGTTCTCTCTTGGAGTGATAAACAGAAGGGTGTACCGGTGGTTAGAGACTACGTACTTCTCATCCCACGGAATCAGGGAAAGACATATCTTTCACTCAAAATGCATCCTCAACCTTACAGCTTGATCAAGGACGCATTTCTAAACGGAATTGAACTCTTCAAGATCAACGACACAACGGGTAATCTCGCGGGACCCAACCCAGACCCTCGTCCACAAACCCCCAAGGGTCCCCTTCAAAGCTCAAAAAAGAAAAACGGCGGTGCCACAAATACCCTTGCCGCCGTCGCTGGTGCAGTTTCTGGCGTCGTTTTGCTCTCCTTTATTGTCGCTTTCTTCCTCATAAAACGCTGGAAGGGTTCCAGCAAAAAAGAAGGCCGTGGCAAATCATCGCTACCAACCAACCTCTGCCGCCACTTCTCGATCGCGGAAATCAGAGCCgccaccaacaacttcgacgagctcttcgtcgtcggcgcgggaggcttcgggaacgtgtacaaaggctacatcgacgacggtgcgacacgtgtcgcaatcaagaggctcaaaccgggttctcagcaagcaatgaagggccagatagcacccgagtgtttgcgaaaatttggtgaggttgccttgagttgtttgcatgaggatgggactcagcgaccttccatgAATGACGTCGTTGGGGTGCTCGAGTTTGTTCTGCAGCTTCATGAAAGTGCTGTTAATAGAGTGGTGGTGGGTGGTGGGGATTATGAAGATAATGAAGACATGTTTAGCAGTAGCCATGGTAGCGTACATGTTTCGGATTATAGTAACAGCTCTGGATTGACCACTACAAGCAATGATAGCCATGTGAGTAAGGAATGTGATAGGTTGATCCCCGATCATGCAGTTTTTTCTGAGATTAAGGATCATGAGGCACGATGA 1986 0.4169 MDTTLTRIALGTILFLLLLLSHPYLSIAEDAIYSPLDLFSINCGSSTNLSTLDGRNWIGDIKFLSQSNDSVAATPLTPSTQQAPYTSARLSHSQFTYSFPVTPGPNFLRLFFYSTSYLNFDRPKAYFSVKVNQHTLLQHFNASLNADADDDPQDILFREYCINLQDAHQNLNITFIPSTTDSYAFINGIEIVSMPPYLYYTNSNVDNPGLLPQLVGGSTYTIENHSALETMYRLNVGGKDTSPIDDTGMLRTWDADDQYVTSQSVLSVDYEQRTKLSFTETPNYTAPDLVYRSVRSMGTNGSINTGFNLTWQLPVDYGFFYLLRLHFCELNPKVHNPGDLIFYIFIQDHLVEDMADVLSWSDKQKGVPVVRDYVLLIPRNQGKTYLSLKMHPQPYSLIKDAFLNGIELFKINDTTGNLAGPNPDPRPQTPKGPLQSSKKKNGGATNTLAAVAGAVSGVVLLSFIVAFFLIKRWKGSSKKEGRGKSSLPTNLCRHFSIAEIRAATNNFDELFVVGAGGFGNVYKGYIDDGATRVAIKRLKPGSQQAMKGQIAPECLRKFGEVALSCLHEDGTQRPSMNDVVGVLEFVLQLHESAVNRVVVGGGDYEDNEDMFSSSHGSVHVSDYSNSSGLTTTSNDSHVSKECDRLIPDHAVFSEIKDHEAR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02266 661 MobiDBLite consensus disorder prediction 417 441 - -
Cca07g02266 661 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 546 629 - -
Cca07g02266 661 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 31 546 - -
Cca07g02266 661 Gene3D - 38 194 - -
Cca07g02266 661 Gene3D - 226 412 - -
Cca07g02266 661 ProSitePatterns Protein kinases ATP-binding region signature. 513 536 IPR017441 GO:0005524
Cca07g02266 661 PANTHER OS07G0166700 PROTEIN 546 629 IPR045272 GO:0004714|GO:0006468
Cca07g02266 661 PANTHER OS07G0166700 PROTEIN 31 546 IPR045272 GO:0004714|GO:0006468
Cca07g02266 661 Gene3D Phosphorylase Kinase; domain 1 478 562 - -
Cca07g02266 661 Pfam Malectin-like domain 41 411 IPR024788 -
Cca07g02266 661 SUPERFAMILY Protein kinase-like (PK-like) 483 545 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02266 Cca-Chr7 51013730 51016303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02266 546 661 Receptor kinase-like Gene Family AT5G39000 36.220 9.50e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02266 - - gmx:100814046 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02266 07 51013730 51016303 Cca07g02266 07 51013730 51016303 ECH
Cca09g00319 09 7440766 7445599 Cca07g02266 07 51013730 51016303 PCT