Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02261 ATGGTGCAAGAACTTAGCAGTTTGCTGAGCAACAAGAACAACCAATTAATGGCCTTTTTCTTGATGTCTTTGAGAATAGGTTTGATGCTATTTTCTTTTCCTCATTGTGAACATTTTGGCAACTCCGGATTTAGCCAAGCCGCTAGTGCCCTATCACGCAAGGGCACTAGCGGCTTGGCTAAATCCGAAGTTGCCAAAATcaacatggcggccaaactctcagacttgcgagtttcCTTAAAAGGACCACATTATGCATCAAAGCCAACACCAAAGACAATATCAAAAGATGGCTTTATAGGTACATATGGTTATGGGGCTCCCGAGATTTCAGAAAACAATGCATTAACAGATAAATGCGATGTTTACTCCTTTGGCGTAGTTCTACTAGAAGTGGTATGCAAAGACAAGCTAAAAGTTGTTGAGAAGAGGCAGAAGCAGCCTGTTGAGGAGAATATTGATCCGAGTCTGAAAGGAAAGATTGCAGCAGAGTGTTGGGAGGTATTTATGGATATCACAGAAAGATGCTTGAAGTTTGATCCAAATGAGCGACCAGCAATGGGTGAAGTTGAAGTTCAGCTTGAGCTTGCACTGTCACTGCAGGAAGAAGCAGATGTCATAAATACTTGTGGTGAATATACCCTATTATCTATGACCATTATTAATTAG 669 0.3857 MVQELSSLLSNKNNQLMAFFLMSLRIGLMLFSFPHCEHFGNSGFSQAASALSRKGTSGLAKSEVAKINMAAKLSDLRVSLKGPHYASKPTPKTISKDGFIGTYGYGAPEISENNALTDKCDVYSFGVVLLEVVCKDKLKVVEKRQKQPVEENIDPSLKGKIAAECWEVFMDITERCLKFDPNERPAMGEVEVQLELALSLQEEADVINTCGEYTLLSMTIIN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02261 222 Gene3D Transferase(Phosphotransferase) domain 1 51 212 - -
Cca07g02261 222 PANTHER OS07G0166700 PROTEIN 68 217 IPR045272 GO:0004714|GO:0006468
Cca07g02261 222 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02261 222 PANTHER TYROSINE KINASE FAMILY PROTEIN 68 217 - -
Cca07g02261 222 Pfam Protein tyrosine and serine/threonine kinase 96 193 IPR001245 GO:0004672|GO:0006468
Cca07g02261 222 SUPERFAMILY Protein kinase-like (PK-like) 93 191 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02261 Cca-Chr7 50971174 50972463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02261 68 204 Receptor kinase-like Gene Family AT5G38990 39.073 7.61e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Cca07g02261 PK_Tyr_Ser-Thr 4.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02261 - - ccaj:109791407 298.901