Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02248 ATGAAAGTGGTACAAGTTTTCAACGTAGCACCAGCTTCGGAATCACATGAGTTACCATCTCAAACATCGCTTCCCCTCACCTTCTTCGACATACTATGGTTAAGGCTACCTCCTGTTGAACGCATCTTCTTCTACGAATTCCCTCACCCAACCCCACTCTTCTTCGATACCCTTCTTCCCAAACTCAAACACTCTCTTTCTCTCGCATTAGGTTACTTTTTTCCTCTTGCGGGCCATCTCACATGGCCTTTTCACTCCGATAAGCCCATCATCAATTACAACACTCGTGACTCTGTGTCCCTCACTGTAGCTGAATCTGACGCTGATTTCAACCATCTAGCTGCCTCGGATCTTATTGAAGCTAAAGAGATTCACCATCTTATACCCCACTTGACCATATCCCATGAACAAGCTACAATTTTAGCCTTACAACTTACGCTATTTCCAAACCGTGGTTTTTCCATTGGAATAACCTCACACCATGCTGTTCTAGATGGCAAAACTTCAACATCGTTTATCAAATCATGGGCTTATCTTTGTAGAGAATCATCCTCTTCTTTGCCACCTGAACTTTGTCCTTTCTATGAAAGGGAAGAAGTGGTAAAAGACGCTAATCATTTGGGGGCAAAATATTGCAGTGATTGGTTAAAGCAAGGTGGACCCAACAACAGAAGCCTCGTGGTTTGGGATATGCAGGTCCCAGAAGACTCCACTAGAGGCTTGTTCAAACTCTCTCGTTGGGATCTTGAGAAGCTGAAGCAGTATGTGTTATCCAAGAACAAAGGGAACACCAACCTTCGCCTGTCAACGTTTGTGTTATGTGTGGCCTATGTTTCGGTTTGCAGAGTGAGGGCAGAAGAAACAAAAAACAAAAGCTTTGTGTTGGCTTTGAATGTCGATTGCAGGGGTCGTTTGGAGCCACTTACGCCTGCAAATTATTTTGGGAACTTCGTTGGGGCGAGACTTGCTACTGTTGAAACAAAAAAACTGTTGGCGGAAGATGGTATACTCGTGGCAGTGGAAGCACTTAGTGATGCTTTGGAAACTCTAAAAGATGGAGCGTTGACTGGGGCAGAAAATTGGTCATCGTTGTTGCTTGAAGGGTTTAACGCCGATGCGAGGATAATTGGCGTTGCTGGGTCTCCTAAGTTTGAGGTTTATGGTAATGACTTTGGTTGGGGAAGACCGAAGAAGGTGGAGATGGCGTCTATAGACAGAACTGGGGCGTTTTGTTTATCAGATTGCAGAAGTGGTGATGGGGTTGAGATTGGTTTTGTGTCCAACAAAGAGGTCATGGAAGCCTTTGCTTCTCTCTTTGTCAATGGCCTTCAATCTTGA 1338 0.4462 MKVVQVFNVAPASESHELPSQTSLPLTFFDILWLRLPPVERIFFYEFPHPTPLFFDTLLPKLKHSLSLALGYFFPLAGHLTWPFHSDKPIINYNTRDSVSLTVAESDADFNHLAASDLIEAKEIHHLIPHLTISHEQATILALQLTLFPNRGFSIGITSHHAVLDGKTSTSFIKSWAYLCRESSSSLPPELCPFYEREEVVKDANHLGAKYCSDWLKQGGPNNRSLVVWDMQVPEDSTRGLFKLSRWDLEKLKQYVLSKNKGNTNLRLSTFVLCVAYVSVCRVRAEETKNKSFVLALNVDCRGRLEPLTPANYFGNFVGARLATVETKKLLAEDGILVAVEALSDALETLKDGALTGAENWSSLLLEGFNADARIIGVAGSPKFEVYGNDFGWGRPKKVEMASIDRTGAFCLSDCRSGDGVEIGFVSNKEVMEAFASLFVNGLQS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02248 445 PANTHER - 1 445 - -
Cca07g02248 445 Gene3D - 1 226 IPR023213 -
Cca07g02248 445 SUPERFAMILY CoA-dependent acyltransferases 265 445 - -
Cca07g02248 445 Pfam Transferase family 16 437 - -
Cca07g02248 445 Gene3D - 233 445 IPR023213 -
Cca07g02248 445 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02248 Cca-Chr7 50813502 50815185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02248 42 435 Monolignol Biosynthesis Gene Families AT5G48930 26.277 7.17e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02248 - - gmx:102660160 676.396