Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02247 ATGGAAGTGGTACAAGTTTTCAACATAGCACCTACTTCGGAATCACAAGAGCTACCATCTCAAACATCGCTTCCCCTCACCTTCTTCGACATACTATGGTTAAGGCTACCTCCTGTTGAACGCATCTTCTTCTACGAATTCCCTCACCCAACCCCACTCTTCTTCGATACCCTTCTTCCCAAACTCAAACACTCTCTTTCTCTCGCATTAGGTTACTTTTTTCCTCTTGCGGGCCATCTCACATGGCCTTTTCACTCCGATAAGCCCATCATCAATTACAACACTCGTGACTCTGTGTCCCTCACTGTAGCTGAATCTGACGCTGATTTCAACCATCTAGCTGCCTCGGATCTTATTGAAGCTAAAGAGATTCACCATCTTATACCCCACTTGACCATATCCCATGAACAAGCTACAATTTTAGCCTTACAACTTACGCTATTTCCAAACCGTGGTTTTTCCATTGGAATAACCTCACACCATGCTGTTCTAGATGGCAAAACTTCAACATCGTTTATCAAATCATGGGCTTATCTTTGTAGAGAATCATCCTCTTCTTTGCCACCTGAACTTTGTCCTTTCTATGAAAGGGAAATAATCAAAGATCCCAACGAACTAGAAGCAAAATATTGCAGTGATTGGCTAAAGCATGGTGGACCCAACAATAGAAGCCTCGTGGTTTGGGATCTGCAAGTTCCAGAAGATGCAATTAGAGGCTCATTCAAACTCTCTCGTTCGGATATTGAAAAGCTGAAGCAGTTTGTGGTGTCAAACAAGAAAGGGAACACCAACACCAACCTTCGCTTGTCTACGTTTGTGTTATCCGTTGCATACGCGTTGGTTTGCAGAGTGAGAGCAGAAGAAGTAAAAAGTAAAAGATTTGTTTTGGCTGTCCCCGTTGATTGTAGGCGTTGGTTGGAGCCACCTCTTCTTCCAACGTATTTTGGAAACTGCATTGGGGCCAAATTTGTCATTGTTGAAACAATAGAATTGGCAACAGAAGAAGGAGTGGTTGTGGCTGTGGAAGCACTGAGTGAAGCTTTGGAAACTGTGAAGGACGGTGTGCTGAATGGAGCGGAAAATTGGTCAACGAGGATGCTTGGGGGTCTCGTCACTGATGACAAGATAATTGGCACTGCTGGCTCACCCATGTTTGAGGTTTATGGTAATGACTTTGGGTGGGGAAGACCTAAGAAGGTGGAGATGGTGTCTATTGACAGAACTTCTGCGCTTAGTTTTTCTGATACCAGAAATGGAGATGGTGTTGAGATAGGTTTTGTGTCCAAGAAAAGAACCATGGAAACCTTTGCTTCTCTCTTTGCCAAAGGCCTTCAATCTTGA 1341 0.4385 MEVVQVFNIAPTSESQELPSQTSLPLTFFDILWLRLPPVERIFFYEFPHPTPLFFDTLLPKLKHSLSLALGYFFPLAGHLTWPFHSDKPIINYNTRDSVSLTVAESDADFNHLAASDLIEAKEIHHLIPHLTISHEQATILALQLTLFPNRGFSIGITSHHAVLDGKTSTSFIKSWAYLCRESSSSLPPELCPFYEREIIKDPNELEAKYCSDWLKHGGPNNRSLVVWDLQVPEDAIRGSFKLSRSDIEKLKQFVVSNKKGNTNTNLRLSTFVLSVAYALVCRVRAEEVKSKRFVLAVPVDCRRWLEPPLLPTYFGNCIGAKFVIVETIELATEEGVVVAVEALSEALETVKDGVLNGAENWSTRMLGGLVTDDKIIGTAGSPMFEVYGNDFGWGRPKKVEMVSIDRTSALSFSDTRNGDGVEIGFVSKKRTMETFASLFAKGLQS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02247 446 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 1 446 - -
Cca07g02247 446 Pfam Transferase family 15 438 - -
Cca07g02247 446 Gene3D - 232 446 IPR023213 -
Cca07g02247 446 Gene3D - 1 225 IPR023213 -
Cca07g02247 446 PANTHER - 1 446 - -
Cca07g02247 446 SUPERFAMILY CoA-dependent acyltransferases 240 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02247 Cca-Chr7 50806783 50808245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02247 42 397 Monolignol Biosynthesis Gene Families AT5G48930 24.661 1.06e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02247 - - gmx:100805184 713.375