Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02246 ATGGCTTCTGGCAACATAAAAATCTACGACCACTCCCGCGTCTCTCCGCCGACATCAACACTTCAAACATCCCTCTCTTTAACATTCTTCGACTTGTTCTGGCTCCGCCTCTACCCCGTGGAGCGCATATTCTTCTACACCCTCCCTACACCCCTTTCACACCCCTCCACTTTCTTCAACCACGTCGTTCCCACCCTCAAAACCTCCCTCTCCCACACCCTCCAACACTTCCCCGCCCTCGCCGGAAACCTCGTGTGGCCCTCCGGCTCCCCAATTCCACTCGTCAAATACACCCTCGGCGACACCATTTCGTTCGTGGTGGCACAATCCGAAGCAGACTTCGACCAAACCCTGGACAACTCACCACGCAATGCCTCGGAGTCACGCGCTTTAGTACCCCACTTGGAATCATCTGATTCTCACGCCGAGGTTCTCTCTCTTCAAATCACTCTCTTCCCCAACAGAGGATTCACCATCGGCATCAGCACCCACCATGCTGTCCTCGACGGAAAATCCTCCACCCTTTTCGTCAAGGCATGGTCTTCACTATGTAAAACCATTATCGAGTCGGAATCAGAGCCAATAAAGTCTCCACCTTTGGTGAAAGGTTTGCAACCTTTCTTCGACAGAACCGTGATCAAACCCGCGAGTGAATTAGGTCTCAACATCACTGAAGATTGGACTGAGATATTAGCAAAAAGGTTCCCTCAAGATAACGGTGATGGGCGATGCTTAAAGCTTCTACCTTCCTCTCCGAGAATCGAGGACGCGGATCGTGCCACGTTCGTGCTGACACGAGCGGATTTGGAGAAGTTGAAGAAAAGGGTGTTGTCCAAGTGGGAGTTGGAATCGAAATCGAAGGATGTTTCGAAGCCAGCTACGTTGTCGTCGTTTGTTGTGACAGTCGCTTACGCGCTAGTTTGCATTGCGGGGTCTAATCGATTTGGGGTTTATGAAACCGATTTTGGTTGGGGGAAGCCTGCGAAGGTGGAGATAGCCTCGGTGGATAGAGCTATGACCATTGGTTTGGCAGAGAGCAAGGATGCGAAAGGTGGTGTTGAAGTTGGCCTTGTTCTGAATAAGGATGTCATGGATCTGTTTCGGACTTTGTTTCATGAAGGATTGTCCAACGAGTGA 1137 0.5084 MASGNIKIYDHSRVSPPTSTLQTSLSLTFFDLFWLRLYPVERIFFYTLPTPLSHPSTFFNHVVPTLKTSLSHTLQHFPALAGNLVWPSGSPIPLVKYTLGDTISFVVAQSEADFDQTLDNSPRNASESRALVPHLESSDSHAEVLSLQITLFPNRGFTIGISTHHAVLDGKSSTLFVKAWSSLCKTIIESESEPIKSPPLVKGLQPFFDRTVIKPASELGLNITEDWTEILAKRFPQDNGDGRCLKLLPSSPRIEDADRATFVLTRADLEKLKKRVLSKWELESKSKDVSKPATLSSFVVTVAYALVCIAGSNRFGVYETDFGWGKPAKVEIASVDRAMTIGLAESKDAKGGVEVGLVLNKDVMDLFRTLFHEGLSNE 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02246 378 Gene3D - 6 237 IPR023213 -
Cca07g02246 378 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 310 - -
Cca07g02246 378 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 309 378 - -
Cca07g02246 378 Pfam Transferase family 6 196 - -
Cca07g02246 378 Pfam Transferase family 284 369 - -
Cca07g02246 378 Gene3D - 306 377 IPR023213 -
Cca07g02246 378 SUPERFAMILY CoA-dependent acyltransferases 63 193 - -
Cca07g02246 378 PANTHER - 1 310 - -
Cca07g02246 378 PANTHER - 309 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02246 Cca-Chr7 50796038 50797479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02246 6 214 Monolignol Biosynthesis Gene Families AT5G48930 28.910 2.42e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02246 - - ccaj:109814825 739.954