Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02211 ATGCCCAACACCTTCTCCTCTCTCCTTCTCCTTAGGTGGATTAGTAAAAAGTTGCGAAGAAGAAACACGGTCAGCAATGGAGAGAGTGGCAGCGACAGCAGTGATACCGGTGTGGGAGGGACGGTTATGGATGATAATCCATTTGGCAGCGTGGTGGAGTGTTACGCGTGCACGCAGGTAGGGGCGCCGGTGTTTCACTCCACCAGCTGCGACAGCTTCCACCAGCAGCTGCAGTGGGAGGCCTCGGCGGGGTCCTCGCTGGTGCCGATCCAGAACCGGCCGGGGAAGGCCTCAGGGTTCCGCGGCGTCACGCAGGGGCCTTTCGGGCGGGTTCTGGATCCGCGGAGCAAGCGCGTGCAGAGGTGGAACCGAGCGCTGCTGCTGGCGCGTGGGGTGGCGCTGGCGATAGACCCGCTGTTCTTCTACGCGCTGTCGATCGGGCGGGAGGGGTCGCCGTGCCTGTACATGGGCGGGGGGCTGGCGGCGATGGTGACGGTGGCGCGGACGAGCGTGGACGCGGTGCACTTGCTGCACGTGTGGCTGCAGTTCAGGCTGGCGTACGTGTCACGAGAGTCGCTGGTGGTGGGGTGCGGGAAGCTGGTGTGGGACGCGCGTGCGATCGCGTCGCATTACTTGCGCTCGTTGAAGGGGTTCTGGTTCGACGCCTTCGTCATACTCCCCGTTCCCCAGGCTGTGTTTTGGTTGATAGTGCCAAAATTGATAAGAGAAGAGAAAATAAAAATCATTATGACCATAATGCTATTGATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCATAGCATCTGCATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGATTTGGTCTCAATCTCATAGCTTATTTCATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGTGTTGCGTCCTGCCTCAGGCAGCAGTGTGAAAGAACTAATGGATGCAATCTTTCTGTGTCATGCTCAGAGGAGGTATGCTACCAGTCTCTGTTACCAGCAGGCACAATAGGAAATTCATGTGGTGGAAACTCAACATTGGTAAGAAAGCCTTTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCAGTCATATCCAGCAACTCTTTGGCAGTGAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTCGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATCGTACTCAGTGGATTACTGCTTTTCACATTATTGATTGGTAACATCCAGGTATTCTTGCATGCAGTCATGGCAAAGAAGAGAAAGATGCAACTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCGCGATTAAGACAAAGAGTTCGCCATTTTGAACGTCAGAGATGGGCTGCCATGGGAGGAGAAGATGAGATGGAAATGATCAAAGACTTGCCCGAGGGACTGAGGAGGGACATCAAGCGCCATCTTTGCCTTGACCTCATTAGAAAGGTTCCTCTATTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAGGCCCTTAGTCTTCTCCAAAGATGAAAAGATAATCAGAGAAGGTGATCCTGTGCCAAGGATGGTGTTCATCGTCCGAGGACGCATAAAACGCAACCAAAGTCTGAGCAAAGGCATGGTGGCCTCAAGCGTCCTTGAGCCAGGGGGGTTCTTGGGCGATGAGCTACTCTCCTGGTGCCTTCGCCGGCCATTTATCGACCGGCTTCCAGCCTCCTCAGCCACATTCATATGCCTTGAATCAGCAGAAGCCTTTGGCCTTGATGCTGACAACTTGAGGTACATCACTGATCACTTCAGGTACAAGTTTGCCAATGAGAGGCTGAAGAGAACAGCAAGATATTACTCATCCAATTGGAGAACATGGGCTGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACCCCTGTAAGGGACAGTGGAGGCACTGAGCGCAGGCTATTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATGA 2142 0.5159 MPNTFSSLLLLRWISKKLRRRNTVSNGESGSDSSDTGVGGTVMDDNPFGSVVECYACTQVGAPVFHSTSCDSFHQQLQWEASAGSSLVPIQNRPGKASGFRGVTQGPFGRVLDPRSKRVQRWNRALLLARGVALAIDPLFFYALSIGREGSPCLYMGGGLAAMVTVARTSVDAVHLLHVWLQFRLAYVSRESLVVGCGKLVWDARAIASHYLRSLKGFWFDAFVILPVPQAVFWLIVPKLIREEKIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTNGCNLSVSCSEEVCYQSLLPAGTIGNSCGGNSTLVRKPLCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCLDLIRKVPLFHNLDDLILDNICDRVRPLVFSKDEKIIREGDPVPRMVFIVRGRIKRNQSLSKGMVASSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFICLESAEAFGLDADNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVRDSGGTERRLLQYAAMFMSIRPHDHLE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02211 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 57 713 - -
Cca07g02211 713 MobiDBLite consensus disorder prediction 24 40 - -
Cca07g02211 713 CDD CAP_ED 526 636 IPR000595 -
Cca07g02211 713 ProSiteProfiles cAMP/cGMP binding motif profile. 526 636 IPR000595 -
Cca07g02211 713 Gene3D Helix hairpin bin 452 517 - -
Cca07g02211 713 SUPERFAMILY cAMP-binding domain-like 453 640 IPR018490 -
Cca07g02211 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 57 713 - -
Cca07g02211 713 Gene3D - 160 449 - -
Cca07g02211 713 MobiDBLite consensus disorder prediction 22 42 - -
Cca07g02211 713 Gene3D Jelly Rolls 524 642 IPR014710 -
Cca07g02211 713 SUPERFAMILY Voltage-gated potassium channels 113 447 - -
Cca07g02211 713 Pfam Ion transport protein 122 444 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02211 Cca-Chr7 50301569 50308123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02211 8 713 Ion Channels AT5G15410 75.485 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02211 K05391 - gmx:100798823 1289.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02211 07 50301569 50308123 Cca07g02211 07 50301569 50308123 ECH