Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02207 ATGGGATCGTATTCCTTAAAGAAAGAGAACCATGTGGTGGAAACTCCAACCCCACAAAGAGACCATGACGCTGATACTACCCTGTATGCCATGGTGCTAGGTTCCAACGTGGTCTTTCCTGCAGCTCTCAACGCTGCAATTGAGCTCAACGTGTTTGAGATCATTGCAAAGGAAAGCTCACAAGAGAGTGGTGGATTCATGTCACCCCTTGAAATTGCTTCCAAGTTACCAACACAAAAACAACATTGTCATGAGTTGCCAAATAGGCTTGAACGTTTGCTGCGTTTGCTTGCTAGCTACTCTCTTCTTTCTGTTTCCACTCGCACCAATGAGGATGGTAGCACAGATAGAGTTTATGGGGTCTCACCAGTGGGTAAATATTTTGTCTATGATGAAAATGGTGATGGTTATCTCGCGTCATTCACATCATTTCTGTGTCACCCTGCATTGTCAGGGGTGTGGCTGAATTTTAAGGAAGCGATCATTGATCCTGAGATTGACCTGTTCAAGAAGGTTCATGGAATGTCCAAATATGAGGGCATATCAACTTTGGTTGATGTGGCAGGTGGAATTGGACAATGTCTCAAATTGATCATCTCCAAATACCCTTCAATTAAGGGCATTAATTTTGACCTCCCACATGTGATTGAAAACGCACCACCCATTCCAGGGGTTGAGCATATCGGGGGAAATATGTTTGAAGGTGTTCCACAGGGTGATGCCATGATGCTAAAGGCTATATGCCACAATTGGTCGGATGAAAAAGCCATAGAAATTTTAAGCAATTGTTACAAAGCTTTGCCAGCAAAGGGGAAGGTCATTGTTGGGGATTTCATACTGCCAGAAGATCCAGAACCTACAAATGATTATAAAGTGGTTTCAATTCTTGATAACATCATGTTTATTACACCAGGTGGAAGGGAAAGAACTGAGAAACAATTTGAGAGTTTGGGCAACCGTTCTGGATTTTCTAGGTTTCAAGTTGTCTGTCGAGCCTTCTCTACTATGGCAGTGATGGAATTTTATAAGTAA 1032 0.4254 MGSYSLKKENHVVETPTPQRDHDADTTLYAMVLGSNVVFPAALNAAIELNVFEIIAKESSQESGGFMSPLEIASKLPTQKQHCHELPNRLERLLRLLASYSLLSVSTRTNEDGSTDRVYGVSPVGKYFVYDENGDGYLASFTSFLCHPALSGVWLNFKEAIIDPEIDLFKKVHGMSKYEGISTLVDVAGGIGQCLKLIISKYPSIKGINFDLPHVIENAPPIPGVEHIGGNMFEGVPQGDAMMLKAICHNWSDEKAIEILSNCYKALPAKGKVIVGDFILPEDPEPTNDYKVVSILDNIMFITPGGRERTEKQFESLGNRSGFSRFQVVCRAFSTMAVMEFYK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02207 343 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 178 343 IPR016461 GO:0008168
Cca07g02207 343 PANTHER O-METHYLTRANSFERASE 178 343 IPR016461 GO:0008168
Cca07g02207 343 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 178 343 - -
Cca07g02207 343 Pfam Dimerisation domain 42 98 IPR012967 GO:0046983
Cca07g02207 343 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 179 - -
Cca07g02207 343 PIRSF O-mtase 8 180 IPR016461 GO:0008168
Cca07g02207 343 PIRSF O-mtase 176 343 IPR016461 GO:0008168
Cca07g02207 343 Pfam O-methyltransferase domain 169 324 IPR001077 GO:0008171
Cca07g02207 343 PANTHER O-METHYLTRANSFERASE 1 179 IPR016461 GO:0008168
Cca07g02207 343 SUPERFAMILY "Winged helix" DNA-binding domain 23 132 IPR036390 -
Cca07g02207 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 340 IPR029063 -
Cca07g02207 343 Gene3D - 38 166 IPR036388 -
Cca07g02207 343 Gene3D Vaccinia Virus protein VP39 167 332 IPR029063 -
Cca07g02207 343 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02207 Cca-Chr7 50285638 50287305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02207 17 333 Monolignol Biosynthesis Gene Families AT5G54160 44.759 7.43e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02207 - - gmx:100798295 551.977