Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02202 ATGAATGGAAGGTGGGTGGAGCGCACGAATCAAAGACCTGAGATTCGTGTTGTGTCGTTCAAGTTGCTGATGCGTGTGCTATTTGGATTGGCATTTCACATACCTGGAAAGACATTTTGTTTCTGCCTGCTATTTCTCTTGTCAATCAAGTgggtggagCAAGCACTATGGAGGCCTCCGGAGCACCCGTGGGAAAAACAATTTGGAAGACTTCCGGGAAGAACATCAAACGATGTGAAAAATTACTGGAACACGTACATCCGACGTAAAGAACTCTCTCACACGAAAGAAAAGAACGTAAAGCAGAAAGAGGTGGAGACCAAAGTGAAAAGTCACGAAGTGATAAGGCCTGTACCTCAAACTTTGTCAAAAACATCCCCGTGGTTGCGAGGGAAATTCATTAATAGTTCAAAAGTTGGTGTTAGTGAAGCAGGTGCAGATTCATTAGGGTCTGAGAATTGGTGGAAAACTTTGTTAGATGATAAGGAAGACAATGCACGTAACAGTAACACGTGTTTCTTTGGTGTGGAAGATGGGGCACTAGACTTTTGGACTCAAGAGCTTACTTCAATTGATTGTGACTTTCTTGCAGAAGGTGGAATTAATTGGAGTGATTTTCTTCTGCGAGATTAG 633 0.4202 MNGRWVERTNQRPEIRVVSFKLLMRVLFGLAFHIPGKTFCFCLLFLLSIKWVEQALWRPPEHPWEKQFGRLPGRTSNDVKNYWNTYIRRKELSHTKEKNVKQKEVETKVKSHEVIRPVPQTLSKTSPWLRGKFINSSKVGVSEAGADSLGSENWWKTLLDDKEDNARNSNTCFFGVEDGALDFWTQELTSIDCDFLAEGGINWSDFLLRD 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02202 210 Gene3D - 49 116 - -
Cca07g02202 210 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 91 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02202 Cca-Chr7 50250663 50252016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02202 64 183 MYB Transcription Factor Family AT4G09460 30.081 6.49e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02202 - K16166 ccaj:109802754 339.347