Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02157 ATGTCAGAAAAACTTTCCCACATTTCATCCTTGAATGAGCCTTTACTACCAGGGAGGGAGCAGCATGTGCTAGGGCATGTCATAGATGACGAAAAAGTCACAGCCTCTTTTCCTTCTACTGATAATACTGTATCATTTTTTCGCACCTGTCTTAATGGACTCAATACATTATCAGGTGTTGGGATACTCTCTGTTCCATATGCTCTTGCAGCTGGAGGGTGGTTAAGCTTGACTCTTTTGCTTGCTATTGCTGCTGCAGCATGTTACACAGGCATGTTAATTCAAAGATGCTTGGATATGAATTCGAATATTAGAAGCTACCCTGATATAGGTGAGGTTGCATTTGGAAAGATAGGAAGGTTAGTAGTTTCAGTGTCCATGTACACTGAGCTATACTTAGTTTCAACAGGGTTCTTGATTCTAGAAGGTGATAACTTGAGTAATTTATTCCCAATTGAGGAGGTTCAGATAGGTGGCTTGGCAATTAGTGGGAAGCAATTCTTTGTGATATTGGTTGCACTTATCGTCTTGCCAACAGTTTGGTTGGATAACTTGAGCCTACTTTCTTATGTTTCTGCAAGTGGAGTTTTTGCTTCTGCTATCATTATTCTCTCAATATTATGGACTGCAACATTTGATGGAGTTGGTTTTCATCAAAAGGGGACTCTTTTTAATTGGAATGGAATCCCCACAGCTGTTAGCTTGTATGCCTTTTGTTACTGTGCACATCCAGTCTTCCCCACTTTGTACAATTCCATGACAAACAAACACCACTTCTCTAATGTCCTATTTGTATGCTTTGCGTTGAGCACAATGGGTTATGCATCGATGGCTATAATTGGTTACCTAATGTTTGGCCCACAAGTTGAATCACAAGTAACATTAAACCTGCCACTAGACAAAGTAAGTTCAAATTTAGCAATATACACTACTTTGATCAATCCCATATCCAAGTATGGTTTGATGGCAACACCGATTACGAATGCTTTGAAAGACTTCCTTCCAAGAACGTACAGGAATAGAATGAGCAACATTTTAGTGAGCACTGCGTTGGTAATAAGCACTACCATTGTTGCCCTCACTGTTCCTTTCTTTGGGTATCTCATGTCCCTGGTTGGAGCGTTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGTTACTTGAAGATTTCAGGCACTTACAGGAAATTTGGGAGTGAAACGGTGGCCATAGTAGCAATAATAATAGCAGGTATAGCAATGGGAATATCCGGGACTTACACATCTGTCAGGGACATAGTGCAACATTTGTAA 1299 0.4034 MSEKLSHISSLNEPLLPGREQHVLGHVIDDEKVTASFPSTDNTVSFFRTCLNGLNTLSGVGILSVPYALAAGGWLSLTLLLAIAAAACYTGMLIQRCLDMNSNIRSYPDIGEVAFGKIGRLVVSVSMYTELYLVSTGFLILEGDNLSNLFPIEEVQIGGLAISGKQFFVILVALIVLPTVWLDNLSLLSYVSASGVFASAIIILSILWTATFDGVGFHQKGTLFNWNGIPTAVSLYAFCYCAHPVFPTLYNSMTNKHHFSNVLFVCFALSTMGYASMAIIGYLMFGPQVESQVTLNLPLDKVSSNLAIYTTLINPISKYGLMATPITNALKDFLPRTYRNRMSNILVSTALVISTTIVALTVPFFGYLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGSETVAIVAIIIAGIAMGISGTYTSVRDIVQHL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02157 432 PANTHER AMINO ACID TRANSPORTER AVT1J 40 429 - -
Cca07g02157 432 PANTHER OS05G0424000 PROTEIN-RELATED 40 429 - -
Cca07g02157 432 Pfam Transmembrane amino acid transporter protein 43 423 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02157 Cca-Chr7 49730230 49732098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02157 29 429 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.921 2.80e-171 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02157 K15015 - gmx:100794374 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02157 07 49730230 49732098 Cca07g02157 07 49730230 49732098 ECH