Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g02139 | ATGGGATGCAGCATTTTGTTTTTCACAAAATATTTTGATCTGCAAAGGATGCAGAATTTCTCTGTGACTGCCTTTATTGTTATTTATGGTATGGTTATTATGGAGATAGTATTGGAGTTAGAAGCCGCGCCTACAGCATCGCAGCTTCGATCGGAGGCAATTGCAATAAAAAATAGTGGATGGTGGAATCAACAGCAGCCAAAACCATACGATATATGTTTGTGGGATGGCATAGTTTGCAACAACGATGGAAGCATAACAGGAATCACGTATCCGTTTATAACAAAAGGAATTAGATTTGCAACACTTAACTTATCCGCTTTCAAGAATTTAGAAAGGCTAGAGGTCTGGGAAAGTGGACTAAACGAGACCATCCCACAAGAAATTGGTAATCTCCCAAAACTCACTCATCTAGATATGTCCTACAATAATCTTTATGGTGAGATACCTTCCTCACTAGGAAATCTTACCCAATTAAAGAGCCTAATCATCTCCACTACCAGCATTCAAGGCCCCATTCCTCATGAATTGTTCTTCCTGAAAAATCTTACTGTGTTAGATCTATCTTGCAACAGAATCAATGGGACCTTGCCCATTTCACTTACAAATCTCACTAAATTAGAAAGGCTTGACATTTCTCACAATCTACTAGTTGGTTCCCTAGAACCCTTTTCAGTTGGAAGCCATGCAACACTAACCACTATTGACATCAGTCACAACTTCATTAGTGGTGAAATACCGCCAGAGCTTGGATATGTCAACTACTTTCCATCCTTAGAAAGTTTGGATCTAAGCTATAATAATCTTACCGGGGCAGTTACTCTATTCAACAAACCTTTCTCTAATTTGAACATTTCATTCAATTATTTAAAGGGTCCCATTCCAGATAGTTTCCCTGCTTCTGCGCTCGTAGGCAACGAGGATCTTTGTAGCGACATATTATATACTCAAACCAACTTCCAATTCCAGCCTTGTTCAGCCAGTGGCAACAAGGTAAGACACAAACTGGTCATAGTTCTTCCTATCCTTATTTTTCTAATCTTGGCCTTCTTTCTGCTGATATATCTATGGTTCATTCACGTTAAAATTAAAAACAAACATGCAAATACAACCTCAGCAACTAAGAATGGGGATTTGTTCTGTATATGGAATTATGATGGAAGCATAGCCTATGAAGACATCATTAGAGCAACCCAAGACTTTGACCTGAAATATTGTATTGGGACAGGAGCTTATGGGAGTGTTTATAAGGCACAATTACCTAATGGAAAGGTTGTTGCCTTGAAAAAACTTCATGGCTTTGAAGCAGAGGTGCCGGCTTTTGATGAGAGTTTCAGAAATGAAGTCAAAGTATTATTAGAAATAAAGCATCGACATATCGTGAAGCTCTTTGGATTTTGCTTGCACAGAAGAATCATGTTTTTGATCTATGAGTACATGGAAAAAGGAAGCTTGTTTTCAGTCCTGTATGATGATGTAGAAGCAATGGAATTGGATTGGAAAAAGAGGATTAACATAGTGAAAGGCACTGCACATGCTCTTTCATATCTTCATCATGATTGCACTCCTCCTATTGTTCACAGAGATATATCAGCCAGCAATGTATTGCTTAACTCAGAGTGGGAGCCTATTGTTGGTGACTTTGGCACAGCCAGACTCCTCCAACGTGACTCATCCAATAGAACTATAGCTGCTGGAACCATTGGATATATAGCTCCTGAACTTGCCTATACAATGGTCGTGAATGAAAAATGTGATGTTTTTAGTTTCGGAGTAGTGACACTTGAAATTTTGGTGGGGAAACATCCTAAGGAAATCCTGTCATCACTCCAATCAGCATCAACTCGTATCATCACATTATATGAACTATTGGATCGGCGCCTCCCATCACCAAATATTGAAGTTTCACTAGACATAGTTCGTGTTGCTATGATAGCATTTGCATGCTTGAATCCCAATCCTTGTTCTCGTCCAACGATGAAACAAGTGTCTCAATGTTTTTTGAGTCAGCCAACTCCATTACTCATTCCTTTGCATGAAATTTCGTTGCAGCAGCTCGTGAGACAAGAACTCCAATCATCTGGAATTGTCAACTCCGCGTAG | 2103 | 0.3928 | MGCSILFFTKYFDLQRMQNFSVTAFIVIYGMVIMEIVLELEAAPTASQLRSEAIAIKNSGWWNQQQPKPYDICLWDGIVCNNDGSITGITYPFITKGIRFATLNLSAFKNLERLEVWESGLNETIPQEIGNLPKLTHLDMSYNNLYGEIPSSLGNLTQLKSLIISTTSIQGPIPHELFFLKNLTVLDLSCNRINGTLPISLTNLTKLERLDISHNLLVGSLEPFSVGSHATLTTIDISHNFISGEIPPELGYVNYFPSLESLDLSYNNLTGAVTLFNKPFSNLNISFNYLKGPIPDSFPASALVGNEDLCSDILYTQTNFQFQPCSASGNKVRHKLVIVLPILIFLILAFFLLIYLWFIHVKIKNKHANTTSATKNGDLFCIWNYDGSIAYEDIIRATQDFDLKYCIGTGAYGSVYKAQLPNGKVVALKKLHGFEAEVPAFDESFRNEVKVLLEIKHRHIVKLFGFCLHRRIMFLIYEYMEKGSLFSVLYDDVEAMELDWKKRINIVKGTAHALSYLHHDCTPPIVHRDISASNVLLNSEWEPIVGDFGTARLLQRDSSNRTIAAGTIGYIAPELAYTMVVNEKCDVFSFGVVTLEILVGKHPKEILSSLQSASTRIITLYELLDRRLPSPNIEVSLDIVRVAMIAFACLNPNPCSRPTMKQVSQCFLSQPTPLLIPLHEISLQQLVRQELQSSGIVNSA | 700 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g02139 | 700 | Pfam | Leucine Rich Repeat | 134 | 156 | IPR001611 | GO:0005515 | |
Cca07g02139 | 700 | SUPERFAMILY | L domain-like | 102 | 298 | - | - | |
Cca07g02139 | 700 | SMART | LRR_typ_2 | 180 | 203 | IPR003591 | - | |
Cca07g02139 | 700 | SMART | LRR_typ_2 | 256 | 278 | IPR003591 | - | |
Cca07g02139 | 700 | SMART | LRR_typ_2 | 204 | 228 | IPR003591 | - | |
Cca07g02139 | 700 | SMART | LRR_typ_2 | 132 | 156 | IPR003591 | - | |
Cca07g02139 | 700 | SMART | LRR_sd22_2 | 132 | 158 | - | - | |
Cca07g02139 | 700 | SMART | LRR_sd22_2 | 204 | 226 | - | - | |
Cca07g02139 | 700 | SMART | LRR_sd22_2 | 180 | 203 | - | - | |
Cca07g02139 | 700 | SMART | LRR_sd22_2 | 229 | 264 | - | - | |
Cca07g02139 | 700 | ProSitePatterns | Protein kinases ATP-binding region signature. | 407 | 429 | IPR017441 | GO:0005524 | |
Cca07g02139 | 700 | Gene3D | Phosphorylase Kinase; domain 1 | 361 | 479 | - | - | |
Cca07g02139 | 700 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 525 | 537 | IPR008266 | GO:0004672|GO:0006468 | |
Cca07g02139 | 700 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 45 | 150 | - | - | |
Cca07g02139 | 700 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 138 | 208 | - | - | |
Cca07g02139 | 700 | Pfam | Protein kinase domain | 406 | 665 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g02139 | 700 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 197 | 693 | - | - | |
Cca07g02139 | 700 | Gene3D | Ribonuclease Inhibitor | 45 | 316 | IPR032675 | - | |
Cca07g02139 | 700 | Gene3D | Transferase(Phosphotransferase) domain 1 | 480 | 671 | - | - | |
Cca07g02139 | 700 | Pfam | Leucine rich repeat | 158 | 217 | IPR001611 | GO:0005515 | |
Cca07g02139 | 700 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 45 | 150 | - | - | |
Cca07g02139 | 700 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 138 | 208 | - | - | |
Cca07g02139 | 700 | ProSiteProfiles | Protein kinase domain profile. | 401 | 675 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g02139 | 700 | Pfam | Leucine Rich repeat | 257 | 271 | IPR001611 | GO:0005515 | |
Cca07g02139 | 700 | SUPERFAMILY | Protein kinase-like (PK-like) | 382 | 666 | IPR011009 | - | |
Cca07g02139 | 700 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 197 | 693 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g02139 | Cca-Chr7 | 49297290 | 49299546 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g02139 | 125 | 599 | Receptor kinase-like Gene Family | AT4G08850 | 41.379 | 5.46e-112 | 360 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Cca07g02139 | Pkinase | 7.9e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g02139 | - | - | gmx:102661105 | 799.66 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca07g02139 | 07 | 49297290 | 49299546 | Cca07g02139 | 07 | 49297290 | 49299546 | ECH |