Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02135 ATGTTGCCCCTCCTCCGTCAGCAACCCCAACATCCCTCCCTCTCACTTTCTTCGACTTTTCCTTGCTCAGGTTCTCTCCCATTGAGTTCATCTTCTTCTATTCCCTCCCACACCCTTCCAAACCAAGTGGTTCCAAATCTCAAAACCTCTCTCTCTCACACCCTCCACCACTTCCTCCCTCTAGCTGGCAGCGTCGTTTGGCCTTCCGATTCCCCAGCACCCTTCGTCCAATACACCCCCGGTGACGTTGTTTCCCTCGTGGTTGCAGAATCTGACGCTGACTTCGACCACTTAACAGATTACTCGCCTCATGAAGCTACACTGTCTCGTTCTTTGGTACACCACTTGGACTCATCCGATTCTCGTGCTTCTGTTGTCTCTCTTCAGATCACTCTCTTCCCAAACAAAGGCTTCAGCATAGGCGTCAGTGCCCACCATGGGGTCCTTGATGGAAAATCTTCAACCCTTTTCGTCAAGGCCTGGACTTCTCTATGCCAAGCCAACAATGAAAATGAAACACAAAAACCATCTTTGGTGCAGGGGTTGGAGCCTTTCTTTGACAGAACAGTCATCAAAAAACCAACGCATTTGGGAGATAACTACACAGAATACTTGACTAGCTTCTTCTCCAAACTCTTCCCTGGTGAAAACAGCAACCCTCGGTGCTTGAGGATTCTACCTTTCCTTCCCAGACTCAAGGGCACGGTTCGAGCCACGTTTGCTCTCACGCGAGGGGATTTGGAGAAGATAAAGAAAAGGGTCTTATCCAAGTGGGATGTAGTGGAAGAATCTGATTCAAAGCCACCTACTTTATCATCCTTTGTTCTCAGCTACGCTCATGCCCTAGTTTGCATGGCAAAAGCGATTCACGGGGTTGAAAGGGAGAAACAAAAGTTTTCCTTTGCTTTCCCGGTGGATTGCAGGGCCAGGTTGGAGCCTCAAGTGCCTAGTAACTACTGTGGCAACTGTGTGTGGTCGCATTTAGTGGATGCAGAACCCTTGGACTTTATAAAGGAAGAAGGGGTGGTGATTGTTGCCAAGAGCATTCATAGAAAAGTGAAGAAGTTAGGTGAACAAGCTTTTAATGGGACTTCTGGATTCGCTGATTTGGCGAAAGAGGGGGTTCAAACGATAGGAGCGTCAATGTCTAACAGATTTGGGTTTTATGGGACTGATTTTGGTTGGGGAAAGCCTGCTAAGGTGGAGCTAACATCAATGGATAGAGGTTTATCCATTGGGTTGGCAGAGGGTAAGGATGGGAGTGGTGGGGTTGAGGTTTGCCTTGTTCTGAATAAACATGAGATGGATCTCTTTGCTGCTCTATTTCGTGAAGGACTCTGA 1341 0.4787 MLPLLRQQPQHPSLSLSSTFPCSGSLPLSSSSSIPSHTLPNQVVPNLKTSLSHTLHHFLPLAGSVVWPSDSPAPFVQYTPGDVVSLVVAESDADFDHLTDYSPHEATLSRSLVHHLDSSDSRASVVSLQITLFPNKGFSIGVSAHHGVLDGKSSTLFVKAWTSLCQANNENETQKPSLVQGLEPFFDRTVIKKPTHLGDNYTEYLTSFFSKLFPGENSNPRCLRILPFLPRLKGTVRATFALTRGDLEKIKKRVLSKWDVVEESDSKPPTLSSFVLSYAHALVCMAKAIHGVEREKQKFSFAFPVDCRARLEPQVPSNYCGNCVWSHLVDAEPLDFIKEEGVVIVAKSIHRKVKKLGEQAFNGTSGFADLAKEGVQTIGASMSNRFGFYGTDFGWGKPAKVELTSMDRGLSIGLAEGKDGSGGVEVCLVLNKHEMDLFAALFREGL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02135 446 Gene3D - 19 212 IPR023213 -
Cca07g02135 446 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 28 446 - -
Cca07g02135 446 Gene3D - 233 446 IPR023213 -
Cca07g02135 446 PANTHER - 28 446 - -
Cca07g02135 446 Pfam Transferase family 39 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02135 Cca-Chr7 49219745 49221284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02135 47 444 Monolignol Biosynthesis Gene Families AT5G48930 24.641 4.62e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02135 - - ccaj:109795933 863.988