Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02134 ATGACCCGCTTCCTTTCTTGTCGTTCCTCTCCCCACAAATCAAATAATATAGCCAACACTCCATTGACGATTTTGCTTCCTCACTCTTCTTTAGTTGCTCTTCTATTCTCTGCATATGTGTTCCTCTGCTGGTTTAAAGACATAGTTGAAGCAACAGAAGGTTTTGACACCAAATACTGCATAGAGGCTGGTGGTTATGGTAGTGTCTACAAAGCACAGCTACCTAGTGGTAGAGTAGTGGCCTTGAAGAAACTCCACAATTTAGAAGCCAATGAACCATCAATCCACAGGATTTTCAAGAATGAGTACATGGAAAGGGTAAGCTTGTATTGCATTCTCCACAATGACATTGAAGCTGTGGAATTGGATTGGACAAAGAGGGTCAACATTGTGAAAGGCATAGCACATAGCTTATCATACCTTCACCATCATCGCAAGCCAGCAATTATTCACAGAGATGTAACAACCAAAAATGTTCTCTTGAATTTAGAATCGGAGGTTTGTCTCTCTGACTTTGGCATAGCCAGACTTCTAAACTCTAGTTCCTTCAATCGAACAGTACTTGCTGGCACTTACGGATATATTGCACCAGGTAAGCTATTTGTATGTGCATGTAATGAGGAAAATTGA 630 0.4079 MTRFLSCRSSPHKSNNIANTPLTILLPHSSLVALLFSAYVFLCWFKDIVEATEGFDTKYCIEAGGYGSVYKAQLPSGRVVALKKLHNLEANEPSIHRIFKNEYMERVSLYCILHNDIEAVELDWTKRVNIVKGIAHSLSYLHHHRKPAIIHRDVTTKNVLLNLESEVCLSDFGIARLLNSSSFNRTVLAGTYGYIAPGKLFVCACNEEN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02134 209 SMART serkin_6 55 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02134 209 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 102 207 - -
Cca07g02134 209 Gene3D Phosphorylase Kinase; domain 1 25 112 - -
Cca07g02134 209 ProSitePatterns Tyrosine protein kinases specific active-site signature. 149 161 IPR008266 GO:0004672|GO:0006468
Cca07g02134 209 Gene3D Transferase(Phosphotransferase) domain 1 113 205 - -
Cca07g02134 209 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 102 207 - -
Cca07g02134 209 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 44 102 - -
Cca07g02134 209 Pfam Protein kinase domain 94 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02134 209 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 44 102 - -
Cca07g02134 209 ProSiteProfiles Protein kinase domain profile. 55 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02134 209 SUPERFAMILY Protein kinase-like (PK-like) 34 198 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02134 Cca-Chr7 49209676 49210482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02134 45 201 Receptor kinase-like Gene Family AT4G08850 44.211 1.47e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Cca07g02134 Pkinase 4.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02134 - - gmx:102670020 272.707