Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02102 ATGAGAATCGCTTCCTTTCCTCCTCCTTCTTCCGCCTCCGGTTGGTCGCGTTTCTGTTCGTCGGCGCTCCGATCCAAGCGTCTCGTATCTCCGGCGGAGAAGGCCGCGCGCGAAAACTCCGACCTCGGCCTCTCCCGCCGCCTCGGCGTCTTTGACCTTGTGCTCCTCGGAATTGGCGCCTCCATCGGCGCCGGCATCTTCGTCGTCACCGGCACCGTCGCTCACGACGCCGGACCCGGAGTAACCATTAGTTTTATACTTGCGGGGGCGTCATGTGTTATAAATGCACTCTGTTATGCTGAGCTGGCTTCTAGATTTCCTGCTGTTGTCGGAGGAGCATATCTATATACATACACAGCGTTTAATGAACTTACGGCTTTTCTTGTTTTTGCACAATTAATGCTTGACTATCACATTGGGGCAGCTAGCATAGCAAGAAGCCTAGCAAGTTATCTGATAAATATTCTTGAACTCTTTCCTGTTTTCAAAGATAACATTCCAAAATGGATTGGTCATGGGGAAAACATAGGCGACGTGCTATCCATCAATATCTTAGCTCCAATTCTGCTAATAATTCTCACTTTAATTCTCTGTCAGGGTGTTCAAGAATCATCAGTTGTGAATTGTCTTATGACGGTGACCAAGGTAGTCATTGTTATCATTGTCATTTTTGCCGGAGCATTTAAGGTTGACACGTCCAACTGGTCTCCCTTTGTTCCAAATGGTTTAAAATCCATATTTACAGGAGCTACCGTAGTCTTCTTTGCATATGTTGGATTTGATGCAGTTGCCAATTCTGCCGAAGAATCTAAGAGGCCTCAGCGGGATTTGCCAATAGGCATAATAGGAAGCCTCTTAGTATGTATTGCATTGTACATTGGAGTATGCTTGGTGATTACTGGAATGGTTCCATACCAGTTACTAGGAGAAGAAGCTCCTTTGGCTGAAGCTTTTACATCTAAGGGTTTAAAGTTTGTTTCTATTCTGATTAGTGTTGGTGCCGTTGCTGGACTTACAACAACACTCCTTGTTGGTCTTTACGTTCAGTCTCGACTATATCTTGGGCTCGGAAGGGATGGTCTACTACCCTCAATATTTGCTAAAGTCCACTCCAAATGTCACACCCCTATTCATTCTCAGGTCTGGGTTGGCTTGATTGCCAGTGTTTTGGCTGGGCTATTGAATGTGCATGTGCTCTCTCACATTCTTTCCGTTGGTACACTGACTGGCTATTCGGTTGTCTCAGCGTGTGTTATTGTACTTCGCTGGAAGGATAAGACAAATAGTCATGTATCATCTTCTGCTGAGCGGGAAGGTGTAATTTGCCTCGTTACTGTTGCTGTTTCTGGATTTGCTATGGGGGTCTTATACCGTTACGATGCTTCATATTTTTTTCTGATTCTGCCTTTAGTTATCGCAGCTGGTGCTTCTGCTGCTCTTGTTTTCCGCCAGGTTTATGCAGATGCACCAGGGTTTTCTTGTCCGTGGGTTCCCCTTCTGCCAATTATTTGCATCTTCTTTAACATGTTCTTATTTGCCCAGTTACATCATGAAGCATGGGTGAGATTTGTGGTTCTCTCTGTTGTCATGGTTGGTGTTTATGCAATATATGGCCAGTATCATGCTAACCCCGGTGCAGACGATATTATCTATCACGAGGCACCAGAGGAAGAAGCACTATGA 1683 0.4545 MRIASFPPPSSASGWSRFCSSALRSKRLVSPAEKAARENSDLGLSRRLGVFDLVLLGIGASIGAGIFVVTGTVAHDAGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYLINILELFPVFKDNIPKWIGHGENIGDVLSINILAPILLIILTLILCQGVQESSVVNCLMTVTKVVIVIIVIFAGAFKVDTSNWSPFVPNGLKSIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYQLLGEEAPLAEAFTSKGLKFVSILISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHSKCHTPIHSQVWVGLIASVLAGLLNVHVLSHILSVGTLTGYSVVSACVIVLRWKDKTNSHVSSSAEREGVICLVTVAVSGFAMGVLYRYDASYFFLILPLVIAAGASAALVFRQVYADAPGFSCPWVPLLPIICIFFNMFLFAQLHHEAWVRFVVLSVVMVGVYAIYGQYHANPGADDIIYHEAPEEEAL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02102 560 Pfam C-terminus of AA_permease 492 541 IPR029485 -
Cca07g02102 560 PANTHER CATIONIC AMINO ACID TRANSPORTER 9-RELATED 10 553 - -
Cca07g02102 560 Pfam Amino acid permease 48 453 IPR002293 GO:0016020|GO:0022857|GO:0055085
Cca07g02102 560 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 10 553 - -
Cca07g02102 560 PIRSF AA_transporter 461 560 - -
Cca07g02102 560 PIRSF AA_transporter 32 489 - -
Cca07g02102 560 Gene3D Amino acid/polyamine transporter I 44 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02102 Cca-Chr7 48837355 48842686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02102 10 485 Organic Solute Cotransporters AT1G05940 71.726 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02102 K03294 - gmx:100804988 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02102 07 48837355 48842686 Cca07g02102 07 48837355 48842686 ECH
Cca09g00142 09 2571230 2573227 Cca07g02102 07 48837355 48842686 PCT