Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02100 ATGGTAATGCTTCATGTGCCAATTCTCCCTCATACACCAAGATTTTTGAATAGTTTCCTTTGTTTTGTTACCATGGATCCATTCAAAGGACAAGGAGGCATTCAGATGCTACTAACTGCTGAACAAGAAGCCCAACATATTGTTTCTAGTGCAAGAAATTTAAGGACTCACAGGTTGAAGCAGGCAAAGGATGAGGCAGAGAAGGAGGCAGCACAATACAGAACTCACATGGAAGAAGAGTATCAAAAGTCAATTTCAGAGACCACTGGGAGTTCTGGATCTAATAAGTGGTTGACATGCTACTCAAGTATGTTACAAATATCAAAACATAATGACCTGAGTAATTGCTGA 351 0.396 MVMLHVPILPHTPRFLNSFLCFVTMDPFKGQGGIQMLLTAEQEAQHIVSSARNLRTHRLKQAKDEAEKEAAQYRTHMEEEYQKSISETTGSSGSNKWLTCYSSMLQISKHNDLSNC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02100 116 MobiDBLite consensus disorder prediction 59 83 - -
Cca07g02100 116 MobiDBLite consensus disorder prediction 59 93 - -
Cca07g02100 116 Pfam Vacuolar (H+)-ATPase G subunit 31 95 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cca07g02100 116 Coils Coil 56 83 - -
Cca07g02100 116 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 25 95 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cca07g02100 116 PANTHER V-TYPE PROTON ATPASE SUBUNIT G3 25 95 - -
Cca07g02100 116 Gene3D F1F0 ATP synthase subunit B, membrane domain 29 84 - -
Cca07g02100 116 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 32 94 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02100 Cca-Chr7 48790043 48793022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02100 25 86 Primary Pumps ATPases(2) AT4G25950 66.129 5.44e-25 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02100 K02152 - gmx:100818549 118.242