Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02083 ATGGAGAGGATTGCAGAACCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTTGTTGAGGTATCTAATGCACACACGACTGCTATAAGAGAAGCTGGTCAAAGACTAAATGGACATGATGTTTCAAGTGTGCGTGGAATTCCAGCAAGAGAAGGGAATCAGATTTCGAAATCACGGGACGGTCCTATGACACGTCTAGCCTCCATAAGAGAAGTGGCTCAATTATCAAATGCACGAATTGTTTTGGTAAGAGAGGATATGGGATTTGATACGCGATCCTGTCAAGAGCCTCCCTCTCCTGTGCCTACAAGAACGTGGAAGGGAAAGGGATCTTTACCAGAACATGTAGAGCTTGTTCCCCATATTGAGACATTGAAGGGTAGCAATGATTCTTTTGGGGAAACAGGTCCAAGCTCATTTGCTGGTGCTAGTCATCCACCAGAACCTGTTGATACCGATCTTATGAGAACGGTTTATGTACCTATAGGTCAAACCAAATCAGATCCTGGATGCTTAATGAAGAGTGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCGTGTTCCTGCTAAGAAACCAAGCCTGTCTGTTGTTTCTCCTGCAGAAAGCCTGGTTGAAGAATCAAATGACATTGGTAACTTATCCTCACCATTCTCAGGCGCTCGTGCATCACAGAATACTGAGAACTCTCCCCTTGCCCCGGATTCAGAGGAGAAAGAATGTGTCTGGGATGCATCTTTGCCTCCAAGTGGCAATGTCAGTCCTCATAGTAGTATTGATAGTACAAGTGTTGTTAGAACAATGAGCATTGTTAATAGTTGTGCAAGTACATACCGTAGTGATGCAGTCACTAGTGATGGCATGCTTAGTTTGGACCGGAATTGTGATAGCATTAAAGGAAGTGTAAGAGGGGATTCGCTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAATAAACCTCACAAAGGAAACGATCCGAGGTGGAAGGCTATCCTTGCCATCCGAGCACGGGATGGGATTTTGGGGATGAGCCATTTTAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCGGAACTGAGTGCTACTCGGTGCTATTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCACAGACAGAAAGAGAGATATTGCAGTTGCTGGACCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACCGACAGATTCTCCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCTGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTTGTGTATCGAGACCTTAAACCTGAAAATGTACTGGTACGAGACGACGGTCACATAATGCTCTCAGACTTTGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTGTTAGAAATTTCGACGGCGACCCCTCAAAACGAGCTGGGGGTGCATTCTGTGTCCAGCCGGCTTGCATTGAGCCTTCATCAGTGTGCATCCAGCCTTCATGTTTCATGCCTCGAATCTTCGCTCAGAAAAACAAGAAGTCACGAAAGCCTAAAGCCGAACCTGGCCTGCCATCCAGCACGCTTCCAGAGCTCATTGCTGAACCAACAACGGCTCGGTCGATGTCTTTCGTTGGCACTCACGAATACCTTGCCCCAGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAAACTCCCTTCAAAGGATCAGGAAACCGTGCTACACTGTTCAATGTAGTAGGCCAGCAGCTTAGGTTTCCTGAGTCGCCGGCCACGAGTTATGCAAGCCGAGATCTGATCCGCGGTTTGCTTGTGAAGGAGCCGCAGCACCGTCTTGGCGTGAAGAGGGGCGCAACCGAGATCAAACAGCACCCCTTCTTCGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACACCACCAGAGGTTCCAAGACCAGTTGAATGTGAGCTACCAGCAAAGTTTGAACCAGTTGATACTGTTGGCGTTGGcaacaatatcaacaacaacaacaGTAGTAAGAGAATGGTGGGTAATGACATGAAGCCTGGTGGGGGTAAATATCTTGACTTTGAGTTCTTTTAG 2298 0.4604 MERIAEPKVLPRSLPVLVEVSNAHTTAIREAGQRLNGHDVSSVRGIPAREGNQISKSRDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSCQEPPSPVPTRTWKGKGSLPEHVELVPHIETLKGSNDSFGETGPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSDPGCLMKSVSLKGPFLEDLSIRVPAKKPSLSVVSPAESLVEESNDIGNLSSPFSGARASQNTENSPLAPDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSIKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVRNFDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRIFAQKNKKSRKPKAEPGLPSSTLPELIAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVECELPAKFEPVDTVGVGNNINNNNSSKRMVGNDMKPGGGKYLDFEFF 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02083 765 MobiDBLite consensus disorder prediction 307 339 - -
Cca07g02083 765 PANTHER FLIPPASE KINASE 1-RELATED 75 765 - -
Cca07g02083 765 MobiDBLite consensus disorder prediction 90 109 - -
Cca07g02083 765 MobiDBLite consensus disorder prediction 303 343 - -
Cca07g02083 765 CDD STKc_phototropin_like 364 717 - -
Cca07g02083 765 MobiDBLite consensus disorder prediction 209 233 - -
Cca07g02083 765 MobiDBLite consensus disorder prediction 128 148 - -
Cca07g02083 765 Pfam Protein kinase domain 595 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02083 765 Pfam Protein kinase domain 367 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02083 765 ProSiteProfiles Protein kinase domain profile. 366 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02083 765 SMART serkin_6 366 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02083 765 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 75 765 - -
Cca07g02083 765 SUPERFAMILY Protein kinase-like (PK-like) 348 719 IPR011009 -
Cca07g02083 765 Gene3D Phosphorylase Kinase; domain 1 364 449 - -
Cca07g02083 765 MobiDBLite consensus disorder prediction 209 262 - -
Cca07g02083 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Cca07g02083 765 Gene3D Transferase(Phosphotransferase) domain 1 594 716 - -
Cca07g02083 765 Gene3D Transferase(Phosphotransferase) domain 1 450 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02083 Cca-Chr7 48589094 48594885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02083 1 765 AGC Kinase Gene Family AT2G44830 67.047 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Cca07g02083 Pkinase 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02083 - - gmx:100800019 1409.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02083 07 48589094 48594885 Cca07g02083 07 48589094 48594885 ECH
Cca01g01582 01 35532958 35537648 Cca07g02083 07 48589094 48594885 PCT