Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g02071 | ATGGTATCCTTCAAGAATCTGCGGCAGATTCTTCTTTCGTTTATTTTGGTCTTTCAAACACACTCTTCAACCCAAGTTGCTTGTTTTTCCAAAATCAGTGTTACGGTTGGTGATCAAGCTGCAGCTGAGAACAGTGAAGCAAAGGCACTGTTAAAGTGGAAAGACAGCTTTGACAAGTCCAGTAAATATCTCTTGTCAACATGGACAGGTAATAGTCCATGCAAGTGGAAAGGAATTCAGTGTGACAATTCCAACTCTGTCTCCACCATAAATCTTGCATATTATGGACTCCAAGGTACACTCCACACTCTCAACTTCTCCTCATTTCCCAACCTTGCAGTCCTAAATATCTACAACAACTCCTTTTATGGAACCATTCCCCCACAAATTGGTAACTTGTCCAAAGTAAATGTTTTCAATTTTTCTTGTAATTATTTTAGTGGTTCCATCCCTCAAGAAATGTGGACACTGAGGAGTTTACAAGGCCTTGATGTTTCCACATGCCTACTAAGTGGAACGATTCCTAGTTCCATAGCAAACTTGTCCAACCTGTCATATCTTGCTCTGGGTACCAACAATTTTTCAGGGCACATTCCTCTAGAGATAGGAAAGTTGAACAAATTAGAGCATCTAAATCTTGGAAACATTAACCTTGTCGGTTCCATTCCTCAAGAAATTGGAATGTTGACAAACCTTCAATATATTGATTTGTCAAGAAACAAATTGCTCTCTGGTCCTATCCCTAAAACAATAAGTAACTTGAGTAATTTAAATATACTTTACCTTTCTGAAAATCCCCATTTATCTGGGCCAATCCCATCCTCCATATGGAACATGTCTAACTTGACCGAGCTCTTCCTTAATGAAAACAACCTTTCTGGAACGGTCCCTGATTCCGTAGAAAACTTGGCCAATTTAGAGATACTTCTACTTGATACCAACCACCTTTCTGGGTCCATTCCTTCCACCATTGGAAAATTGACAAAGCTAAATGAGTTGTATTTAAATTTTAACAATTTTTCTGGACCAATTCCTCCCTCAATAGGAAATTTGATCAATTTAACTGGCCTTAGTCTCCAAGGAAACAACCTCATCGGAACAATTCCCGCCACAATTGGGAATTTGAAAAGCCTCACCATTTTAGAATTGTCCACCAACAAACTTAATGGAAGCATTCCACAATCCTTGAATAACATCCTCAACTTTGACACCTTGTTATTAGCTGAGAATGATTTCACAGGCCATTTACCACCTCAAATTTGTTCTACTGGCTCACTACTGTACTTTAATGCTTTTCGCAACCGTTTCACGGGTCTCGTGCCAAGAAGCTTAAAGAATTGCTCAAGTATTCTTAGAATAAGACTGGAAGGAAACCAATTGGAGGGAGATATAGCACAAGATTTTGGTGTCTATCAAAATTTGGAATACATTGATTTGAGTGACAATAAGTTTTACGGCCAAATTTCACCAAACTGGGGGAAGTGCCCTAATCTTGATAGCTTGAAGATATCCAACAATAATCTCTCCGGTGGTATACCAATTGAACTTTTTGAGGCAACTAAGCTAGGGAGGCTTCACCTTTCTTCAAATCAACTGTCTGGAAAGCTGCCAAAAGAGCTAGGTATGCTAAAATCATTAAGTGAACTCAACATCAACAACAATCATTTTTCAGGAAACGTTCCCACTGAAATAGGATTGTTGCAGGATCTCCAATTCTTGGATCTTGGAAAAAATGAGTTGAGTGGCCCAATACCAAAACAAGCTATAATGTTGCCCAAATTAGTAAAATTGAATTTGAGCAATAATAGAATAAATGGAAGGATTCCCGTGGAGTTTAGCAAATTGCAGTCTCTTCAAACTCTTGATCTTAGTGGGAATTTGTTGAGTGGAACAATACCAGGAGATCTAGGAGATTTAAAGCAATTGGAAATGTTGGATCTCTCTTCCAATAATCTTTCTGGTACCATTCCATCCAGTTTTGATCTCATGTTCAGTTTGACTTCGGTCAACATATCAAACAACCAGTTAGAAGGGCCACTTCCAAAAACTCGAGCCTTTCTTAAGGCTCCAATTGAATCATTGAAAAATAACAAAGGCTTGTGTGGCAATGTCACTGGCTTGATGCTTTGCCCAACCAACCACATTCAAAAGAGGCACAAGGGTATTCTGTTGGCATTATTTCTTATCCTGGGTGCTCTTATAGTAGTATTGTGTGGGGTGGGAGTTTCAATGTATATTCTTTGTCGAAAAGCAAAGAAGAAAGAAACTCATGCTAAAGAAAAAGAACAATCAGAGAAAGCACTTGCTGAAGAAGTATTTTCCATATGGAGTCATGATGGAAAAATTATGTTTGAAAATATCATCGAAGCTACCAACAATTTCAATGACACATATCTCATTGGAGTCGGAGGACAAGGATATGTTTACAAGGCTAAGTTGCCTTCGGGTCAGATTTATGCGGTGAAAAAACTTAGTCTGGAAACTGATGGAGAAAAGCCCAATTTCAAAGCTTTTGAAAATGAAATTCGAGCTTTGACTGAAATTAGGCATCGTAACATTATCAGGCTACATGGATTTTGCTCACATTCACGATTCTCATTCTTGGTTTATAATTTCTTGGAAGGGGGTAGCTTGGATCAACTACTAAGCATTGACACAAAAGCAGCTGCATTTGAGTGGGAAATGAGGGTGAATGTTGTTAAAGGTGTAGCCAATGCTTTATCCTATATGCATCATGATTGTAAACCTCCAATAATTCATCGTGACATATCAAGTAAGAATGTTCTTTTGGATTCACAATATGAAGCTCATGTCTCTGATTTTGGAACAGCTAAGATTCTAAAGCCTGGTTCACGCAATTGGACCACATTTGCAGGCACCTTTGGGTATGCAGCTCCAGAGCTTGCCCAAACTATGGAAGTGACCGAGAAATGTGATGTATTCAGTTTTGGAGTGCTTTCTCTAGAAATCATGATGGGGAAGCATCCAGGAGATCTCATTTCTTCATTGCTATCTTCATATTCAGCAACAGTGACTTATAACTTGAAGCTAATTGACTTGTTGGACCAAAGACCACCTCAACCTCTAAAATCAATTTTTGGGGATGTCATTTTGGTTGCTAGCATGGCATTTTCTTGCTTGAGTGAAAATCCATGTTCTCGCCCAACCATGGATCAAGTGTCGAAAAAGCTTATGATGGAGAAATCACCTTTAGCAGAGCAGTTTCCCACGATTAAACTTGGACAGCTGTTGTAA | 3255 | 0.388 | MVSFKNLRQILLSFILVFQTHSSTQVACFSKISVTVGDQAAAENSEAKALLKWKDSFDKSSKYLLSTWTGNSPCKWKGIQCDNSNSVSTINLAYYGLQGTLHTLNFSSFPNLAVLNIYNNSFYGTIPPQIGNLSKVNVFNFSCNYFSGSIPQEMWTLRSLQGLDVSTCLLSGTIPSSIANLSNLSYLALGTNNFSGHIPLEIGKLNKLEHLNLGNINLVGSIPQEIGMLTNLQYIDLSRNKLLSGPIPKTISNLSNLNILYLSENPHLSGPIPSSIWNMSNLTELFLNENNLSGTVPDSVENLANLEILLLDTNHLSGSIPSTIGKLTKLNELYLNFNNFSGPIPPSIGNLINLTGLSLQGNNLIGTIPATIGNLKSLTILELSTNKLNGSIPQSLNNILNFDTLLLAENDFTGHLPPQICSTGSLLYFNAFRNRFTGLVPRSLKNCSSILRIRLEGNQLEGDIAQDFGVYQNLEYIDLSDNKFYGQISPNWGKCPNLDSLKISNNNLSGGIPIELFEATKLGRLHLSSNQLSGKLPKELGMLKSLSELNINNNHFSGNVPTEIGLLQDLQFLDLGKNELSGPIPKQAIMLPKLVKLNLSNNRINGRIPVEFSKLQSLQTLDLSGNLLSGTIPGDLGDLKQLEMLDLSSNNLSGTIPSSFDLMFSLTSVNISNNQLEGPLPKTRAFLKAPIESLKNNKGLCGNVTGLMLCPTNHIQKRHKGILLALFLILGALIVVLCGVGVSMYILCRKAKKKETHAKEKEQSEKALAEEVFSIWSHDGKIMFENIIEATNNFNDTYLIGVGGQGYVYKAKLPSGQIYAVKKLSLETDGEKPNFKAFENEIRALTEIRHRNIIRLHGFCSHSRFSFLVYNFLEGGSLDQLLSIDTKAAAFEWEMRVNVVKGVANALSYMHHDCKPPIIHRDISSKNVLLDSQYEAHVSDFGTAKILKPGSRNWTTFAGTFGYAAPELAQTMEVTEKCDVFSFGVLSLEIMMGKHPGDLISSLLSSYSATVTYNLKLIDLLDQRPPQPLKSIFGDVILVASMAFSCLSENPCSRPTMDQVSKKLMMEKSPLAEQFPTIKLGQLL | 1084 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 327 | 351 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 639 | 662 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 181 | 205 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 109 | 133 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 303 | 326 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 543 | 567 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 615 | 638 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 279 | 302 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 591 | 614 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 229 | 254 | IPR003591 | - | |
Cca07g02071 | 1084 | SMART | LRR_typ_2 | 375 | 398 | IPR003591 | - | |
Cca07g02071 | 1084 | SUPERFAMILY | RNI-like | 332 | 681 | - | - | |
Cca07g02071 | 1084 | Gene3D | Ribonuclease Inhibitor | 42 | 196 | IPR032675 | - | |
Cca07g02071 | 1084 | Gene3D | Ribonuclease Inhibitor | 488 | 588 | IPR032675 | - | |
Cca07g02071 | 1084 | Gene3D | Ribonuclease Inhibitor | 589 | 710 | IPR032675 | - | |
Cca07g02071 | 1084 | Gene3D | Ribonuclease Inhibitor | 396 | 487 | IPR032675 | - | |
Cca07g02071 | 1084 | SUPERFAMILY | Protein kinase-like (PK-like) | 781 | 1065 | IPR011009 | - | |
Cca07g02071 | 1084 | Pfam | Leucine rich repeat | 230 | 292 | IPR001611 | GO:0005515 | |
Cca07g02071 | 1084 | Pfam | Leucine rich repeat | 570 | 628 | IPR001611 | GO:0005515 | |
Cca07g02071 | 1084 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 258 | 1083 | - | - | |
Cca07g02071 | 1084 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 183 | 257 | - | - | |
Cca07g02071 | 1084 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 11 | 185 | - | - | |
Cca07g02071 | 1084 | Pfam | Leucine Rich Repeat | 642 | 661 | IPR001611 | GO:0005515 | |
Cca07g02071 | 1084 | ProSiteProfiles | Protein kinase domain profile. | 794 | 1066 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g02071 | 1084 | Gene3D | Ribonuclease Inhibitor | 296 | 395 | IPR032675 | - | |
Cca07g02071 | 1084 | Gene3D | Ribonuclease Inhibitor | 197 | 295 | IPR032675 | - | |
Cca07g02071 | 1084 | PANTHER | LRR RECEPTOR-LIKE KINASE | 258 | 1083 | - | - | |
Cca07g02071 | 1084 | PANTHER | LRR RECEPTOR-LIKE KINASE | 183 | 257 | - | - | |
Cca07g02071 | 1084 | PANTHER | LRR RECEPTOR-LIKE KINASE | 11 | 185 | - | - | |
Cca07g02071 | 1084 | Pfam | Protein kinase domain | 797 | 1062 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g02071 | 1084 | SMART | LRR_sd22_2 | 375 | 401 | - | - | |
Cca07g02071 | 1084 | SMART | LRR_sd22_2 | 327 | 353 | - | - | |
Cca07g02071 | 1084 | SMART | LRR_sd22_2 | 279 | 305 | - | - | |
Cca07g02071 | 1084 | SMART | LRR_sd22_2 | 639 | 662 | - | - | |
Cca07g02071 | 1084 | SMART | LRR_sd22_2 | 229 | 256 | - | - | |
Cca07g02071 | 1084 | SMART | LRR_sd22_2 | 591 | 620 | - | - | |
Cca07g02071 | 1084 | Pfam | Leucine rich repeat N-terminal domain | 44 | 82 | IPR013210 | - | |
Cca07g02071 | 1084 | PRINTS | Leucine-rich repeat signature | 618 | 631 | - | - | |
Cca07g02071 | 1084 | PRINTS | Leucine-rich repeat signature | 639 | 652 | - | - | |
Cca07g02071 | 1084 | ProSiteProfiles | Leucine-rich repeat profile. | 641 | 663 | IPR001611 | GO:0005515 | |
Cca07g02071 | 1084 | Gene3D | Phosphorylase Kinase; domain 1 | 751 | 872 | - | - | |
Cca07g02071 | 1084 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 918 | 930 | IPR008266 | GO:0004672|GO:0006468 | |
Cca07g02071 | 1084 | Gene3D | Transferase(Phosphotransferase) domain 1 | 873 | 1075 | - | - | |
Cca07g02071 | 1084 | SUPERFAMILY | RNI-like | 90 | 413 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g02071 | Cca-Chr7 | 48351943 | 48355813 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g02071 | 25 | 966 | Receptor kinase-like Gene Family | AT4G08850 | 43.096 | 0.0 | 711 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Cca07g02071 | Pkinase | 1.1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g02071 | - | - | gmx:100814634 | 1601.26 |