Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02068 ATGGTTCGCACGTTTGTAAGGCAAAAATCCATGTTGGTTCTAATTCTCTGTGTGTTTCTAACATTCTCGTGGCCCCAAGCTGCAGCTGAAGACAGCGAAGCAAATGCTCTGTTGAAGTGGAAACACAGCCTTGACACCTCCAGCCAAGCTCTCTTGTCAACATGGAGTGGTAATAGTTCATGCAAATGGAAAGGAATTCAGTGTGACAAATCCAACTCAGTCTCCTCCATAGATCTTACAAATTTTGGACTTAAAGGTACACTTCACACTCTCACCTTCTCCTTTTTCCCTAACCTCCTCACCCTAAATATCTACCAAAACTCCTTTTATGGGACCATTCCCCCACAAATCGGTAACTTGTCCAAAGTAAATGTTTTGAATTTTTCTTTAAATTCTTTCCATGGTTCCATCCCTCAAGAAATGTGGACACTAGGGAGTTTACATAGCCTTGATCTTTCCTTGTGTCAACTAAGTGGAGAGATTCCTAATTCCATAGCAAACTTGTCCAACCTGTCATTTCTAGATTTAGGTGGCAACACATTTTCTAGCCACATTCCTCCACAAATTGGAAAGTTGCACAAGTTGGAGTATCTAGGTATTGCAGGTAGTAACCTCTCTGGTTCCATTCCTCAGGAAATTGGAATGTTGACAAACCTTAGGCTTATTGATTTGTCAAGAAACTCTCTCTCTGGTACTATCCCTGAAACAATAGGTAACATGAGCAATTTAAACCAACTTTACCTTTCAAATAACTCCCTTCTATCAGGACCAATCCCATTCTCCTTATGGAACATGTCTAACTTGACCTTGCTCTACCTAGATGCCAATAAACTTTCTGGTTCAATCCCTGAGTCCATAGAAAAATTGGCCAATTTAGAGCAACTTGCACTTGATATCAATAACCTTTCCGGATCCATTCCTTCCACCATTGGAAACTTGACAAAGCTCACCATGTTGTATTTGAGCTTTAATAATCTTTCCGGGTCGATTCCTCCCTCTATAGGAAATTTGATCAATTTGGATGCCCTTAGCCTCCAAGCAAACAATCTCTCTGGAGCAATTCCTGCCACATTTGGAAACTTGCAAAGGCTCACCATTTTGGAATTGTCCACCAACAAACTTAATGATAGTATTCCACAAGGCTTGTATAACATTACCAACTGGTATTCCTTGTTACTAGCTGAGAATGATTTCACAGGCCATTTACCACCTCAAATTTGCTCTGCTGGCTCACTGGTTTTCTTTAATGCTTATCACAACCGTTTCACGGGTCCAGTGCCAAGAAGCTTAAAGAATTGCTCTAGTATTGCTAGAATAAGACTGGAAGGAAACCAATTGGAAGGAGATATAGCACAAGACTTTGGTGTATATCCAAATTTGAAATACATTGATTTAAGTGACAACAGATTTCACGGTCACATTTCACCAAACTGGGGAAAGTGCCCTAATCTCGATACCTTGATGATGTCCAACAATAATATTTCTGGTGGTATACCAATTGAGCTTGTTGAGGCAACTAATCTAGGTAGGCTACACCTTTCTTCAAATCACTTGAATGGAAAACTACCAAAAGAGATAAGTAAGCTAAAGTCATTGGTTGAACTCAAGATCAGCAACAACCATCTTTCAGGAAACATTCCCACTGAAGTAGGATTGTTGCAGAATCTTCGAGTGTTGGATCTTGCAGCAAACGAGTTGACTGGTGCAATACCAGAACAAGTTATATCATTACCCAAATTACTAGAATTGAATTTGAGCAATAATAAAATAAATGGAAGTATTCCCCTTGAGTTTCGCCAATTCCAGTCTCTTCAATCTCTTGATTTTAGTGGGAATTCATTGAGTGGAACAATACCAAGAAAACTTGCAGAGGTGAAGCAATTGCAATGGTTGAATCTTTCACATAATGATCTTTCTGGAAGTATTCCATCTGGTTTTGATGGCATGTCAAGTTTGATTTCGGTCAACATATCTTACAACCAGTTAGAAGGGCCCCTTCCAAATAATCAAGCCTTTCTTAAGGCTCCAATTGGATCATTAAGAAATAATAAAGGCTTGTGTGGTAATGTCACAGGTTTGCTTCTTTGTCCAACCACCAACCATAGTCAAAAGAGCAACAAAGTCATCCTAGTGGTATTGCTTAGTTTAGGAACTCTAATACTAGTGTTATGTGCGGTGGCACTTTCAATGTATATATTTTATGGTAGTAAAAGAAAGGAAAAAGGTCATTCTAGTTTCGAAGGAGCACATAAGGAAGTATTCTTTTCCATATGGAGCTTTGATGGGAAAATCATGTTTGAAAATATCATTAAAGCTACAGAGAATTTTGATAATAAATATCTCATTGGAGCAGGAAGTCAAGGATATGTTTACAAAGTGGTCTTGCCTACAGGTTTGGTTGTTGCTGTGAAGAAACTTCATTCAGTGATTGATGAGGAAATGTCAGATTTTAGTTCAAAGGCTTTTGCAAGTGAGATTCAAGCCTTGACAGAAATCAAGCACCGAAACATTATAAAGTTGCATGGATTTTGCTCACATTCACAGGTCTCATTTCTTGTTTATGAATTCATGGAGGGGGGCAGCTTAGATCAAATGTTGGACAATGACACACATGCAAGTGCATTTGATTGGGAAAAAAGGGTTAATGTTGTTAAAGGTGTGGCCAATGCTATTTCTTATTTGCATCATGATTGCTCACCTCCAATTGTTCATCGAGATATATCAAGTAAGAATGTTCTTCTAGATCTTGAATATGAAGCTCATGTCTCTGACTTTGGCACTGCAAAGTTTTTGAAGCCAAGTTCAGATAGTTGGACCCAATTTGCAGGCACCTTTGGGTATGCTGCTCCAGAGTTGGCCCAAACAATGGAAGTGAATGAGAAATGTGATGTTTATAGTTTTGGAGTACTTGCTTTGGAAATCATTATGGGAAAACATCCAAGAGATCTCATTTCTCAATTTATGTCACCATCTATGGTACCAATTGTTAATGATTTGCTATTAGCTGATGTTATAGATCAACGACCTCCTCAACCTACAAAACCAATTGATGGGGAGGTGATCTTAATTACAAGGTTAGCATTTGCATGCTTAAGTGAAAATCCACGTTCTCGACCAACCATGGATCAAGTATCTAAGGCTCTTATAACAGGGAAATCACCTTTGCCTGACCAATTTCCTATGATCAAACTAGGACAACTACGCTGA 3207 0.3885 MVRTFVRQKSMLVLILCVFLTFSWPQAAAEDSEANALLKWKHSLDTSSQALLSTWSGNSSCKWKGIQCDKSNSVSSIDLTNFGLKGTLHTLTFSFFPNLLTLNIYQNSFYGTIPPQIGNLSKVNVLNFSLNSFHGSIPQEMWTLGSLHSLDLSLCQLSGEIPNSIANLSNLSFLDLGGNTFSSHIPPQIGKLHKLEYLGIAGSNLSGSIPQEIGMLTNLRLIDLSRNSLSGTIPETIGNMSNLNQLYLSNNSLLSGPIPFSLWNMSNLTLLYLDANKLSGSIPESIEKLANLEQLALDINNLSGSIPSTIGNLTKLTMLYLSFNNLSGSIPPSIGNLINLDALSLQANNLSGAIPATFGNLQRLTILELSTNKLNDSIPQGLYNITNWYSLLLAENDFTGHLPPQICSAGSLVFFNAYHNRFTGPVPRSLKNCSSIARIRLEGNQLEGDIAQDFGVYPNLKYIDLSDNRFHGHISPNWGKCPNLDTLMMSNNNISGGIPIELVEATNLGRLHLSSNHLNGKLPKEISKLKSLVELKISNNHLSGNIPTEVGLLQNLRVLDLAANELTGAIPEQVISLPKLLELNLSNNKINGSIPLEFRQFQSLQSLDFSGNSLSGTIPRKLAEVKQLQWLNLSHNDLSGSIPSGFDGMSSLISVNISYNQLEGPLPNNQAFLKAPIGSLRNNKGLCGNVTGLLLCPTTNHSQKSNKVILVVLLSLGTLILVLCAVALSMYIFYGSKRKEKGHSSFEGAHKEVFFSIWSFDGKIMFENIIKATENFDNKYLIGAGSQGYVYKVVLPTGLVVAVKKLHSVIDEEMSDFSSKAFASEIQALTEIKHRNIIKLHGFCSHSQVSFLVYEFMEGGSLDQMLDNDTHASAFDWEKRVNVVKGVANAISYLHHDCSPPIVHRDISSKNVLLDLEYEAHVSDFGTAKFLKPSSDSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPRDLISQFMSPSMVPIVNDLLLADVIDQRPPQPTKPIDGEVILITRLAFACLSENPRSRPTMDQVSKALITGKSPLPDQFPMIKLGQLR 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02068 1068 SUPERFAMILY Protein kinase-like (PK-like) 759 1048 IPR011009 -
Cca07g02068 1068 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Cca07g02068 1068 Gene3D Ribonuclease Inhibitor 186 284 IPR032675 -
Cca07g02068 1068 Gene3D Ribonuclease Inhibitor 285 381 IPR032675 -
Cca07g02068 1068 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Cca07g02068 1068 SUPERFAMILY RNI-like 345 664 - -
Cca07g02068 1068 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 170 243 - -
Cca07g02068 1068 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 244 1067 - -
Cca07g02068 1068 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 174 - -
Cca07g02068 1068 Pfam Leucine rich repeat 458 518 IPR001611 GO:0005515
Cca07g02068 1068 Pfam Leucine rich repeat 555 614 IPR001611 GO:0005515
Cca07g02068 1068 Pfam Leucine rich repeat 218 278 IPR001611 GO:0005515
Cca07g02068 1068 SMART LRR_typ_2 265 289 IPR003591 -
Cca07g02068 1068 SMART LRR_typ_2 361 385 IPR003591 -
Cca07g02068 1068 SMART LRR_typ_2 168 192 IPR003591 -
Cca07g02068 1068 SMART LRR_typ_2 529 553 IPR003591 -
Cca07g02068 1068 SMART LRR_typ_2 337 360 IPR003591 -
Cca07g02068 1068 SMART LRR_typ_2 577 600 IPR003591 -
Cca07g02068 1068 SMART LRR_typ_2 313 336 IPR003591 -
Cca07g02068 1068 SMART LRR_typ_2 216 240 IPR003591 -
Cca07g02068 1068 SMART LRR_typ_2 96 120 IPR003591 -
Cca07g02068 1068 SMART LRR_typ_2 625 648 IPR003591 -
Cca07g02068 1068 Gene3D Ribonuclease Inhibitor 382 697 IPR032675 -
Cca07g02068 1068 Gene3D Phosphorylase Kinase; domain 1 740 856 - -
Cca07g02068 1068 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 174 - -
Cca07g02068 1068 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 244 1067 - -
Cca07g02068 1068 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 170 243 - -
Cca07g02068 1068 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515
Cca07g02068 1068 ProSitePatterns Tyrosine protein kinases specific active-site signature. 902 914 IPR008266 GO:0004672|GO:0006468
Cca07g02068 1068 ProSiteProfiles Protein kinase domain profile. 776 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02068 1068 Gene3D Transferase(Phosphotransferase) domain 1 857 1054 - -
Cca07g02068 1068 Pfam Protein kinase domain 778 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02068 1068 SMART LRR_sd22_2 553 579 - -
Cca07g02068 1068 SMART LRR_sd22_2 361 387 - -
Cca07g02068 1068 SMART LRR_sd22_2 216 242 - -
Cca07g02068 1068 SMART LRR_sd22_2 601 627 - -
Cca07g02068 1068 SMART LRR_sd22_2 265 294 - -
Cca07g02068 1068 SMART LRR_sd22_2 313 339 - -
Cca07g02068 1068 SUPERFAMILY RNI-like 76 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02068 Cca-Chr7 48258690 48262383 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02068 12 950 Receptor kinase-like Gene Family AT4G08850 43.895 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Cca07g02068 Pkinase 9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02068 - - gmx:100814634 1519.98