Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02065 ATGGAAGGAGAGAGAGGAGGAGGTGGTGCTTCCAATTATGACCTTCAAGTTTCATTCACCAACACCCCACAAGCCATACACGAAATGGGTTTTGTTCAATATGAAGAAAACCAAATCCTTGGCTTCTTGTCACCCTCTTCACAATCTCAATCTTCTCACCTCCCTCAATCCTTAAACAGTGATACTGTTGTTGCTGCTGCCACCACCACAACTGCTGCAACTATCGGATTCATGAGCCATAACAATGATCTTGTCAACAAAACTTGGAGTAACGACCAGGTAGGAACTCTGGATCCAAAGGCTGTCGATGAAGAAAATTGCACTGGAAATGCTAGTGAAGGCAACAACAACGCTTGGTGGAGAAGCGCAGCTACAGAGAAGAACAAGGTGAAAATAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACACGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTCGTCAAAAATAGCCTTCATCCAAGAAGTTACTACCGATGCACCCACAACAACTGTAGGGTGAAGAAGAGGGTTGAACGACTGTCAGAGGATTGTCGTATGGTGATAACCACCTATGAAGGTAGACACAATCACTGCCCTTCCGACGATTCTAATTCATCCGACCATGAATGCTTTACCTCTTTCTAG 681 0.4405 MEGERGGGGASNYDLQVSFTNTPQAIHEMGFVQYEENQILGFLSPSSQSQSSHLPQSLNSDTVVAAATTTTAATIGFMSHNNDLVNKTWSNDQVGTLDPKAVDEENCTGNASEGNNNAWWRSAATEKNKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHCPSDDSNSSDHECFTSF 226
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02065 226 ProSiteProfiles WRKY domain profile. 147 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g02065 226 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 17 224 - -
Cca07g02065 226 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g02065 226 Gene3D WRKY domain 139 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g02065 226 SUPERFAMILY WRKY DNA-binding domain 144 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g02065 226 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 224 IPR044810 GO:0003700
Cca07g02065 226 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca07g02065 Cca-Chr7 48183857 48191303 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02065 7 226 WRKY Transcription Factor Family AT2G44745 59.130 5.93e-78 232
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca07g02065 WRKY 7e-24 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02065 - - gmx:100170677 384.8
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02065 07 48183857 48191303 Cca07g02065 07 48183857 48191303 ECH