Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g02065 | ATGGAAGGAGAGAGAGGAGGAGGTGGTGCTTCCAATTATGACCTTCAAGTTTCATTCACCAACACCCCACAAGCCATACACGAAATGGGTTTTGTTCAATATGAAGAAAACCAAATCCTTGGCTTCTTGTCACCCTCTTCACAATCTCAATCTTCTCACCTCCCTCAATCCTTAAACAGTGATACTGTTGTTGCTGCTGCCACCACCACAACTGCTGCAACTATCGGATTCATGAGCCATAACAATGATCTTGTCAACAAAACTTGGAGTAACGACCAGGTAGGAACTCTGGATCCAAAGGCTGTCGATGAAGAAAATTGCACTGGAAATGCTAGTGAAGGCAACAACAACGCTTGGTGGAGAAGCGCAGCTACAGAGAAGAACAAGGTGAAAATAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACACGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTCGTCAAAAATAGCCTTCATCCAAGAAGTTACTACCGATGCACCCACAACAACTGTAGGGTGAAGAAGAGGGTTGAACGACTGTCAGAGGATTGTCGTATGGTGATAACCACCTATGAAGGTAGACACAATCACTGCCCTTCCGACGATTCTAATTCATCCGACCATGAATGCTTTACCTCTTTCTAG | 681 | 0.4405 | MEGERGGGGASNYDLQVSFTNTPQAIHEMGFVQYEENQILGFLSPSSQSQSSHLPQSLNSDTVVAAATTTTAATIGFMSHNNDLVNKTWSNDQVGTLDPKAVDEENCTGNASEGNNNAWWRSAATEKNKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHCPSDDSNSSDHECFTSF | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g02065 | 226 | ProSiteProfiles | WRKY domain profile. | 147 | 209 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g02065 | 226 | PANTHER | WRKY TRANSCRIPTION FACTOR 12-RELATED | 17 | 224 | - | - | |
Cca07g02065 | 226 | Pfam | WRKY DNA -binding domain | 153 | 209 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g02065 | 226 | Gene3D | WRKY domain | 139 | 205 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g02065 | 226 | SUPERFAMILY | WRKY DNA-binding domain | 144 | 210 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g02065 | 226 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 17 | 224 | IPR044810 | GO:0003700 | |
Cca07g02065 | 226 | SMART | WRKY_cls | 152 | 211 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g02065 | Cca-Chr7 | 48183857 | 48191303 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g02065 | 7 | 226 | WRKY Transcription Factor Family | AT2G44745 | 59.130 | 5.93e-78 | 232 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Cca07g02065 | WRKY | 7e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g02065 | - | - | gmx:100170677 | 384.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca07g02065 | 07 | 48183857 | 48191303 | Cca07g02065 | 07 | 48183857 | 48191303 | ECH |