Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02036 ATGGTTGTGGGTAGCCAAATTTTTGTTGCTAGTTTCTTTCTGCTGATTCTCCGTGGCATGGTTTATGGGACTGATAGTGATATATTCTGCTTGAGAAGTGTAAAGAATGCGCTAAAGGACCCTTACAATTATTTGCAATCATGGAATTTCAACAACAACACAGAAGGGTACATATGCAAGTTTATTGGGGTTGAGTGTTGGCACCCTGATGAGAACAGAGTCTTGAACATCAAATTGTCTAACATGGGACTCAAGGGTCAGTTTCCTCGCGGAATTCAAAATTGTTCAAGCTTAACTGGATTAGATTTTTCGCTTAACAGATTGTCTCAGACCATTCCGGCGGATATATCCACCCTTCTTACATTCGTGACATCTCTTGATCTATCTTCAAATGATTTTACTGGGGAAATACCTGGATCCCTTGCAAACTGTACCTATCTTAATAATCTTAGACTTGACCAAAACCAACTCACTGGTCAAATTCCTGCAAACTTGAGTCAGCTCCCTCGGCTTAAGTCGTTTAGTGTTTCCAATAATTTTTTGACAGGGCTAGTTCCACCCTTTAAAACTGGTATAGCTAATGCAGAAAATTATGCAAATAATTCAGGCCTCTGTGGTGGTCCCTTGGAGGCTTGCCAGGCCAAGTCTTCAAAGAGTAACACTGCAGTTATAGCTGGAGCAGCTGCTGGTGGTGTGACTGTTGCAGCATTAGGACTGGCCATTGGAATGTTCTTCTATGTGCGCCGTCTTTCTTATAGGAAGAAGGAAGAGGACCCTGAAGGAAACAAGTGGGCAAGAAGTCTAAAGGGAACTAAAACAATAAAGGTTTCTATGTTTGAGAAGGCAATTTCAAAAATGAACTTGAGTGATCTCATGAAAGCTACAAATAACTTCAGCAAAAGCAATATTATTGGGTCTGGAAGGTCAGGAACTGTTTACAAAGCTGTCCTTTCTGATGGCACATCACTCATGGTTAAGAGATTGCAGGAATCTCAACACTCAGAGAAAGAATTTCTGTCTGAGATGTCTATACTAGGGTCTGTCAAACACCGTAACTTGGTTCCTCTTTTAGGTTTCTGCCTGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAATATGCCAAATGGTACCCTCCATGATCAACTACATCCAGCTACTGGTGCATGCACCATGGATTGGCCTCTAAGGCTCAAGATTGCAATTGGAGCAGCCAAAGGATTAGCATGGCTTCACCATAGCTGCAATCCCCGCATTATCCACCGAAACATAAGCTCAAAGTGCATCTTGTTGGATGTTGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCTAGATTGATGAACCCAATTGACACACATTTGAGTACTTTTGTAAATGGGGAGTTTGGGGATTTGGGTTATGTTGCTCCTGAATATACAAAAACTTTGGTGGCTACACCTAAAGGGGATGTTTATAGCTTTGGTACTGTGCTTCTCGAGTTGGTGACAGGTGAAAGAGCTACACATGTGGCTAGAGCTCCAGAAACTTTTAAAGGAAATTTGGTAGAATGGATTGCACAGCTAACTAGCAATGCAGAACTACATGATGCCATTGATGAATCACTAGTTGGCAAGGGTGTGGACAAGGAGGTTTTCCAATTTCTGAAGGTTGCATGCAACTGTGTCACAGCAATACCAAAGGAGAGGCCTACCATGTTTGAAGTGTTCCAGCTTCTAAGAGCCATTGGGATTAATTATAATTTCACAACTGAGGACGAGATTATGTTGCCTGAAGACACTGGTGATGCTGATAACTTAGAAGAACTCATTGTAGCACGAGATGGATCGTGA 1830 0.418 MVVGSQIFVASFFLLILRGMVYGTDSDIFCLRSVKNALKDPYNYLQSWNFNNNTEGYICKFIGVECWHPDENRVLNIKLSNMGLKGQFPRGIQNCSSLTGLDFSLNRLSQTIPADISTLLTFVTSLDLSSNDFTGEIPGSLANCTYLNNLRLDQNQLTGQIPANLSQLPRLKSFSVSNNFLTGLVPPFKTGIANAENYANNSGLCGGPLEACQAKSSKSNTAVIAGAAAGGVTVAALGLAIGMFFYVRRLSYRKKEEDPEGNKWARSLKGTKTIKVSMFEKAISKMNLSDLMKATNNFSKSNIIGSGRSGTVYKAVLSDGTSLMVKRLQESQHSEKEFLSEMSILGSVKHRNLVPLLGFCLAKKERLLVYKNMPNGTLHDQLHPATGACTMDWPLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDVDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTKTLVATPKGDVYSFGTVLLELVTGERATHVARAPETFKGNLVEWIAQLTSNAELHDAIDESLVGKGVDKEVFQFLKVACNCVTAIPKERPTMFEVFQLLRAIGINYNFTTEDEIMLPEDTGDADNLEELIVARDGS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02036 609 PANTHER LRR RECEPTOR-LIKE KINASE 6 586 - -
Cca07g02036 609 Pfam Protein tyrosine and serine/threonine kinase 301 570 IPR001245 GO:0004672|GO:0006468
Cca07g02036 609 Gene3D Transferase(Phosphotransferase) domain 1 373 589 - -
Cca07g02036 609 Gene3D Phosphorylase Kinase; domain 1 259 371 - -
Cca07g02036 609 ProSiteProfiles Protein kinase domain profile. 298 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02036 609 Gene3D Ribonuclease Inhibitor 25 214 IPR032675 -
Cca07g02036 609 SUPERFAMILY Protein kinase-like (PK-like) 275 574 IPR011009 -
Cca07g02036 609 CDD STKc_IRAK 304 572 - -
Cca07g02036 609 Pfam Leucine rich repeat N-terminal domain 25 67 IPR013210 -
Cca07g02036 609 PANTHER RECEPTOR-LIKE PROTEIN 55 6 586 - -
Cca07g02036 609 SUPERFAMILY L domain-like 25 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02036 Cca-Chr7 47881090 47884622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02036 13 586 Receptor kinase-like Gene Family AT3G28450 45.862 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Cca07g02036 PK_Tyr_Ser-Thr 2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02036 - - gmx:100817267 1076.62