Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02011 ATGTGTGGGATATTTGCGTATCTGAATTACAACGTCGACAGAGAGAGACGCTACATCTTGCAGGTTCTCTTCAATGGTCTCAGACGATTGGAGTATCGCGGTTACGATTCCGCCGGCATCGCCATCGACGATTCCTCTGCCAAATGCAATTCAAATTCAAATTCCACTCCTCCCCCACTCGTTTTCCGCCAAGAAGGAAACATCGAATCGCTCGTCAAATCCGTCTACAAAGAAGTGGAAGAAACCGAAGTGAACTTGGAAGATCGCTTCGGCACGCACGCGGGGATCGCGCACACTCGCTGGGCGACTCACGGCGAGCCTGCGCCGCGGAACAGTCATCCTCAGACCTCTGGTCCTGGAAATGAGTTCCTGGTGGTTCACAATGGAGTCATCACTAATTACGAGGTTTTGAAGGAGACGCTGCTGCGGCATGGCTACACCTTTGAATCTGAGACTGACACCGAGGTCATTCCCAAGCTCGCCAAGTTTGTTTACGACAAGGCGAACGAAGCGGCTGGTGAGGTTGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTTGAAGGAGCTTATGCCCTTATTTTCAAAAGTCTACATTATCCTAATGAATTGATTGCTTGCAAGCGTGGTAGCCCACTGCTGCTAGGTGTTAAAGAATTGACAGAAAATAAAGACAGCAGTTCAGCATTTGAGGATAACAAATTCCTATCAAAAGATGGAAAGCCTAAAGAATTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACAAAGAAAGTGCTAGTTATTGAGGATGGTGAAGTAGTTCATCTCAAGGATGGTGGGGTTTCTATTTTGAAGTTTGAGAATGACAAGGGAGAACATCGTGCCTCTCTTTCCAGAGCTTTTTCAGTGCGACGCGCATTATCTGTTCTTGAGATGGAAGTTGAGCAAATAAATAAAGGTCATTATGAGCATTATATGCAAAAAGAAATTCATGAGCAACCAGAGTCTCTAACAACCACAATGAGGGGGAGGCTTATACGTCGAGGATCTAACATATCCAAGTCTGTTCTGTTGGGTGGGCTGAAGGATCACCTCAAAACAATTAGGCGAAGTAGAAGGATAGTTTTCATTGGTTGTGGTACAAGTTATAATGCTGCTTTGGCTGCTAGACCCATTTTGGAAGAACTTTCTGGGGTTCCTGTTACTATGGAAATTGCTAGTGATCTATTGGATCGGGAGGGACCAATATACCGAGAAGATACAGCCATTTTTGTTAGTCAATCTGGTGAAACTGCAGACACTTTGCTTGCACTGCAGTATGCTTTAGACAATGGTGCATTGTGTGTTGGGATAACAAACACTGTTGGTAGTGCTATTGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGGAGGCGATACAATTTCATATCAAGCCAGAAGAGAAGCTATCATTGATGGTCTTTTTGACCTTCCAAATAAGGTAAGAGAGGTGCTGAAGCTTGACCAGGAGATGAAGGATCTAGCAAAGCAGTTGATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTCTTGAGGGAGCTTTGAAAGTAAAAGAAGTGGCACTTATGCATAGTGAAGGGATACTTGCTGGTGAAATGAAGCATGGTCCTTTGGCATTAGTGGATGAAAATCTTCCAATTGTTGTTGTAGCTACACGCGATGCTTGCTTCAGGTTGGTTGTGACATTTGAGTAG 1830 0.4443 MCGIFAYLNYNVDRERRYILQVLFNGLRRLEYRGYDSAGIAIDDSSAKCNSNSNSTPPPLVFRQEGNIESLVKSVYKEVEETEVNLEDRFGTHAGIAHTRWATHGEPAPRNSHPQTSGPGNEFLVVHNGVITNYEVLKETLLRHGYTFESETDTEVIPKLAKFVYDKANEAAGEVVTFSQVVLEVMRHLEGAYALIFKSLHYPNELIACKRGSPLLLGVKELTENKDSSSAFEDNKFLSKDGKPKELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGVSILKFENDKGEHRASLSRAFSVRRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRRGSNISKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGVPVTMEIASDLLDREGPIYREDTAIFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMVMLALAIGGDTISYQARREAIIDGLFDLPNKVREVLKLDQEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVVATRDACFRLVVTFE 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02011 609 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 602 - -
Cca07g02011 609 Pfam Glutamine amidotransferase domain 91 198 - -
Cca07g02011 609 Gene3D - 533 607 - -
Cca07g02011 609 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 277 IPR017932 -
Cca07g02011 609 CDD SIS_GlmS_GlmD_1 371 496 IPR035466 -
Cca07g02011 609 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 602 - -
Cca07g02011 609 ProSiteProfiles SIS domain profile. 533 609 IPR001347 GO:0097367|GO:1901135
Cca07g02011 609 CDD SIS_GlmS_GlmD_2 528 606 IPR035490 -
Cca07g02011 609 Gene3D - 308 532 - -
Cca07g02011 609 Pfam SIS domain 366 493 IPR001347 GO:0097367|GO:1901135
Cca07g02011 609 Pfam SIS domain 537 600 IPR001347 GO:0097367|GO:1901135
Cca07g02011 609 CDD GFAT 2 274 - -
Cca07g02011 609 SUPERFAMILY SIS domain 317 606 IPR046348 GO:0097367|GO:1901135
Cca07g02011 609 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 298 IPR029055 -
Cca07g02011 609 ProSiteProfiles SIS domain profile. 362 501 IPR001347 GO:0097367|GO:1901135
Cca07g02011 609 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 283 IPR029055 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02011 21 218 PRT Gene Family AT2G16570 24.257 6.45e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02011 K00820 - gmx:100779312 1093.57