Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02005 ATGGGGTCCTGCTTCTCCGTGGAAAGCAGGAGCCCTGGCCCTACTTCGCCCTCTTCATCTTTCAGGAAGCGCAGGAGCAGCTCCAAGAAGAGGCTCGGGTCAAGGGCCTCTTCCTTTGAGTATTGGAGGAATGACCCTCTGCATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCCTCCCAAGTTGCATCCTTGTTCACCCAGCAAGGCAAGAAGGGAACCAACCAGGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGACAAAATACAATTTTCTGTGGAGTTTTTGATGGCCACGGTCCGTATGGTCACATGGTTGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATGCCCATTGGGAACCTAATGTATCTGGTGAAGAAGTCCTCAAGGAGATTAGCTTTAATACTGCAGGAAGCATGAATTCAGAAGAGGCTGCCTTTGCTTCTGCTGATGACGAATCCAGGGTATCTGTTGATGTTGACGAAACAGAAAAACACCCAGAAATCTTTCAGACACTTAAAGACTCCTTTTTGAAGGCATTCAAAGTAATGGATAGAGAACTGAAGACCCACCAAAGTATTGATTGCTTTTGTAGTGGGACTACAGCAGTAACTCTGATTAAGCAGGGCCGGGATCTTATCATTGGAAATGTTGGTGACTCTAGGGCTGTTCTGGGTACAAGAGAGAAAGATGATTCTCTTGTTGCTGTCCAGTTAACTGTGGATCTAAAACCCAATCTTCCAGCTGAAGCAGAGAGAATCCGCAAATGTAAAGGACGTGTCTTTGCTCTTCAGGACGAACCTGAAGTTGCTCGAGTCTGGTTACCAAACAATGACTCACCAGGCCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTTAAAGATTTTGGCCTGATATCCGTTCCTGAGGTGTCGTATAGACGACTCACTGAGAAGGATGAATTTATTGTCTTGGCAACAGACGGGATTTGGGACGTGCTCTCGAACAAAGAAGTGGTGGACATTGTGGCAGCCGCTCCAAGGCGTGCCTCAGCAGCACGAGCACTGGTTGAGTCAGCCGTCCGTGCTTGGAGGTACAAGTATCCGACCTCCAAAGTGGATGACTGCGCTGTGGTTTGCCTCTTCCTGGACTCGGATGCGCCCAAAGTGGTCACTGCTTCCCATGCCAAGTCCAAGGAGCAACCTAGTTCAATCATCCAAGTCCACAACGGCGATGGGGCCGACGTCTCTGGACCGACCGGTCTGGTAAGGTCAGGAACATGCAGGGAGAATCATGAAGAAAGTAACAACAATGAGGGCGAGCCAAATAAGGAAGAGGAAATAGATGTTGAATCAGAAATAGAGTGGTCTGCTCTTGAAGGGGTGTCGCGTGTGAACACACTACTAACTCTCCCAAGGTTTGAACTTGACAAAGAAGACAAGACTGCTGAAGGGATGAGAAAACGCAAATGA 1467 0.4819 MGSCFSVESRSPGPTSPSSSFRKRRSSSKKRLGSRASSFEYWRNDPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSRQNTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNAHWEPNVSGEEVLKEISFNTAGSMNSEEAAFASADDESRVSVDVDETEKHPEIFQTLKDSFLKAFKVMDRELKTHQSIDCFCSGTTAVTLIKQGRDLIIGNVGDSRAVLGTREKDDSLVAVQLTVDLKPNLPAEAERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAAAPRRASAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSDAPKVVTASHAKSKEQPSSIIQVHNGDGADVSGPTGLVRSGTCRENHEESNNNEGEPNKEEEIDVESEIEWSALEGVSRVNTLLTLPRFELDKEDKTAEGMRKRK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02005 488 ProSiteProfiles PPM-type phosphatase domain profile. 62 381 IPR001932 -
Cca07g02005 488 Pfam Protein phosphatase 2C 134 359 IPR001932 -
Cca07g02005 488 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 468 - -
Cca07g02005 488 CDD PP2Cc 61 381 IPR001932 -
Cca07g02005 488 MobiDBLite consensus disorder prediction 406 450 - -
Cca07g02005 488 Gene3D - 57 383 IPR036457 -
Cca07g02005 488 SMART PP2C_4 53 379 IPR001932 -
Cca07g02005 488 MobiDBLite consensus disorder prediction 1 32 - -
Cca07g02005 488 MobiDBLite consensus disorder prediction 425 441 - -
Cca07g02005 488 MobiDBLite consensus disorder prediction 1 22 - -
Cca07g02005 488 PANTHER ALPHABET, ISOFORM E-RELATED 1 468 - -
Cca07g02005 488 SUPERFAMILY PP2C-like 54 382 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02005 Cca-Chr7 47556826 47561654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02005 1 472 PP2C-type Phosphatase Gene Family AT3G02750 62.405 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02005 - - gmx:100790373 797.349