Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g01999 | ATGGAACAAGACAACCTTAACAACAGCAACAATTCTGATGAAGAAACCTTTGGAGGAGGTTTTCCGCCAAAAAGAAGCATTGCTGAGAGAAGGGGTTTCAATTCCAATGCTGCAAGAATCAACACAGCACTGTTCCGCACTTCCACTTCAACAACCCCTTCACCTTCTCCTGCTGCACGATCACCTCGTCTCACCATTCCCCCTGGCATTAGCCCCACTGCTTTACTTGACTCTCCAATCATGCTTCCAAATTCTCAGGCCATGTCTCCCACTACTGGCACTTTCTTCATGCTGCCGCCTCTAACCCAGGAAGGATCAATGCTCACAGTTGAACAAGGAAGTACGGATATGTCGTCTGTCTCCGATGTTGCCTCCTTCAAATTCAAATTCAAGTCCCTTGGCAATTTGGATCCTAATCCTTTGCCTTCTCACTATTCTGCTTCTCGAAATCAGGTTTCTAGTAATTTCCACTCGGTAAAGGGAGGAAATAGGGAGAGCCAACTACATGCTCAAGTTCAGCCACCATTAGATTTTTCATTCCCAGCAGACTTTTCAAAAGGTCGTTCCATGAAAAATAGTGAAGTCCATTCATACAATGATATGAAAATGGTAAATGATGCCATTGTTAATTCCAATAATGTTGACATGCAAATGTCTGGCTCTGAGGAAGTGAGTGATGAAAGTGCTCTGCCGAAAAACGCCATCCATGGTGAGGATTTTGGGGGGCAACCTGTTTCAGAAGATCAGAAAGACACATCTCATGCAACAGGAGTAGTAAGGACCTCAGAGGATGGTTACAATTGGAGGAAATATGGACAAAAACAGGTAAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGCACACAACCTAATTGTCAGGTCAAGAAAAAGGTGGAAAGATCACATGATGGCCAAATAACAGAAATTATCTACAAGGGTGCTCATAATCATGCAAAACCACACCCTAGTCATAGGGCATCAGCACCTTCTACTGATGAAGTTTCAGATATGGGTGAAGACAGTACTTATGCTAAAGTTGATAATGGATTCATCTGGAGAAATATTCAGTCAGGATTAAAAGATGCAAAAAACAGTTTAGATTGGAAGGCTGATGGTCAGGAAAGGACATCATCAACTTCTGTTGTGACTGAGCTTTCAGATCCTATGTCAACTAACAAAGCTAAATCTCTATCTATGCTTGAATCAGAGGACACTCCTGAGCTTTCTTCTACACTTGCTAGTCATGATGGTGATGAAGATGGAGCCACTCAAGCAATCGTGTCAGCTGAAGACGAAGCTGAAAATGATGAATCAGATTCCAAAAGAAGGAAGAAAGAGAACTATGCGGCTGAATCAAATTTACCTCCTAGGGCTGTTCGTGAGCCAAGAGTGGTAGTCCAAATTGAGAGTGACGTGGACATACTTGATGATGGTTATCGCTGGCGTAAGTATGGGCAGAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACAAGTGCTGGATGTACGGTGAGGAAACACGTGGAAAGGGCTTCACACAACCTAAAATTTGTGATCACTACATATGAGGGAAAGCACAACCATGAAGTGCCTACTGCTAGAACCAACAATCAGATGAACTCAAGTGATGGTCCGAGTGGTGCTAATGGGCATGTGGCTCTTACACTACCCGGTAGCGCCAGTATTCCAAAGCAAGAAACTCATCAAACTCTTGCACATCATTTTGACAGAAAACCTGATTTTGGCCACGAGTTTCTGAGGCCTGGTTTGGTTGGAAGTTTCGGTACTGATATGAAGTTTGGACCTTCTTCCCTTTGCCAAATGAAGTATCCTTCCTTGAACAACACCATGCCTTATGGCTCCTATGGATTGAACCCTGATCGTTGCGCCGCCCCTCAAGCTGGATCCATCGCCTCAATGTTCCCTGATTTTCCAATGCCACTACCCTTGAATCTTCCTCCATCTGGAAACTTTTCACTTGCTGGACTTAACTTCAACTGTGTAAAACCAATGAATCATGTTCAGTCTTACCTTTCCGGGCAGCAGGTGAAGGACATTGACACAGGATTCCTGAGGCCTAAACAGGAACAGAAGGATGATTCTATATACGGCTCGTGCATTCCAGCACTAGATCATGCAAATGCTTCACTCAGTTCTTCAGCGTCACCATCCATTTATCAACGAGTCATGCAGAATTTCCCTTCATAA | 2223 | 0.4359 | MEQDNLNNSNNSDEETFGGGFPPKRSIAERRGFNSNAARINTALFRTSTSTTPSPSPAARSPRLTIPPGISPTALLDSPIMLPNSQAMSPTTGTFFMLPPLTQEGSMLTVEQGSTDMSSVSDVASFKFKFKSLGNLDPNPLPSHYSASRNQVSSNFHSVKGGNRESQLHAQVQPPLDFSFPADFSKGRSMKNSEVHSYNDMKMVNDAIVNSNNVDMQMSGSEEVSDESALPKNAIHGEDFGGQPVSEDQKDTSHATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGAHNHAKPHPSHRASAPSTDEVSDMGEDSTYAKVDNGFIWRNIQSGLKDAKNSLDWKADGQERTSSTSVVTELSDPMSTNKAKSLSMLESEDTPELSSTLASHDGDEDGATQAIVSAEDEAENDESDSKRRKKENYAAESNLPPRAVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKFVITTYEGKHNHEVPTARTNNQMNSSDGPSGANGHVALTLPGSASIPKQETHQTLAHHFDRKPDFGHEFLRPGLVGSFGTDMKFGPSSLCQMKYPSLNNTMPYGSYGLNPDRCAAPQAGSIASMFPDFPMPLPLNLPPSGNFSLAGLNFNCVKPMNHVQSYLSGQQVKDIDTGFLRPKQEQKDDSIYGSCIPALDHANASLSSSASPSIYQRVMQNFPS | 740 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g01999 | 740 | MobiDBLite | consensus disorder prediction | 1 | 72 | - | - | |
Cca07g01999 | 740 | Pfam | WRKY DNA -binding domain | 263 | 318 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g01999 | 740 | Pfam | WRKY DNA -binding domain | 477 | 534 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g01999 | 740 | MobiDBLite | consensus disorder prediction | 436 | 451 | - | - | |
Cca07g01999 | 740 | ProSiteProfiles | WRKY domain profile. | 257 | 321 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g01999 | 740 | Gene3D | WRKY domain | 463 | 529 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g01999 | 740 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Cca07g01999 | 740 | MobiDBLite | consensus disorder prediction | 317 | 339 | - | - | |
Cca07g01999 | 740 | MobiDBLite | consensus disorder prediction | 35 | 59 | - | - | |
Cca07g01999 | 740 | SUPERFAMILY | WRKY DNA-binding domain | 260 | 321 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g01999 | 740 | MobiDBLite | consensus disorder prediction | 369 | 457 | - | - | |
Cca07g01999 | 740 | Gene3D | WRKY domain | 249 | 322 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g01999 | 740 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 7 | 715 | IPR044810 | GO:0003700 | |
Cca07g01999 | 740 | PANTHER | WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 | 7 | 715 | - | - | |
Cca07g01999 | 740 | ProSiteProfiles | WRKY domain profile. | 471 | 536 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g01999 | 740 | SUPERFAMILY | WRKY DNA-binding domain | 469 | 536 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g01999 | 740 | MobiDBLite | consensus disorder prediction | 372 | 413 | - | - | |
Cca07g01999 | 740 | SMART | WRKY_cls | 476 | 535 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca07g01999 | 740 | SMART | WRKY_cls | 262 | 320 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g01999 | Cca-Chr7 | 47468870 | 47473041 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g01999 | 1 | 539 | WRKY Transcription Factor Family | AT5G56270 | 42.523 | 9.60e-102 | 326 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Cca07g01999 | WRKY | 3.9e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g01999 | K18835 | - | gmx:100800211 | 1174.07 |