Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01999 ATGGAACAAGACAACCTTAACAACAGCAACAATTCTGATGAAGAAACCTTTGGAGGAGGTTTTCCGCCAAAAAGAAGCATTGCTGAGAGAAGGGGTTTCAATTCCAATGCTGCAAGAATCAACACAGCACTGTTCCGCACTTCCACTTCAACAACCCCTTCACCTTCTCCTGCTGCACGATCACCTCGTCTCACCATTCCCCCTGGCATTAGCCCCACTGCTTTACTTGACTCTCCAATCATGCTTCCAAATTCTCAGGCCATGTCTCCCACTACTGGCACTTTCTTCATGCTGCCGCCTCTAACCCAGGAAGGATCAATGCTCACAGTTGAACAAGGAAGTACGGATATGTCGTCTGTCTCCGATGTTGCCTCCTTCAAATTCAAATTCAAGTCCCTTGGCAATTTGGATCCTAATCCTTTGCCTTCTCACTATTCTGCTTCTCGAAATCAGGTTTCTAGTAATTTCCACTCGGTAAAGGGAGGAAATAGGGAGAGCCAACTACATGCTCAAGTTCAGCCACCATTAGATTTTTCATTCCCAGCAGACTTTTCAAAAGGTCGTTCCATGAAAAATAGTGAAGTCCATTCATACAATGATATGAAAATGGTAAATGATGCCATTGTTAATTCCAATAATGTTGACATGCAAATGTCTGGCTCTGAGGAAGTGAGTGATGAAAGTGCTCTGCCGAAAAACGCCATCCATGGTGAGGATTTTGGGGGGCAACCTGTTTCAGAAGATCAGAAAGACACATCTCATGCAACAGGAGTAGTAAGGACCTCAGAGGATGGTTACAATTGGAGGAAATATGGACAAAAACAGGTAAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGCACACAACCTAATTGTCAGGTCAAGAAAAAGGTGGAAAGATCACATGATGGCCAAATAACAGAAATTATCTACAAGGGTGCTCATAATCATGCAAAACCACACCCTAGTCATAGGGCATCAGCACCTTCTACTGATGAAGTTTCAGATATGGGTGAAGACAGTACTTATGCTAAAGTTGATAATGGATTCATCTGGAGAAATATTCAGTCAGGATTAAAAGATGCAAAAAACAGTTTAGATTGGAAGGCTGATGGTCAGGAAAGGACATCATCAACTTCTGTTGTGACTGAGCTTTCAGATCCTATGTCAACTAACAAAGCTAAATCTCTATCTATGCTTGAATCAGAGGACACTCCTGAGCTTTCTTCTACACTTGCTAGTCATGATGGTGATGAAGATGGAGCCACTCAAGCAATCGTGTCAGCTGAAGACGAAGCTGAAAATGATGAATCAGATTCCAAAAGAAGGAAGAAAGAGAACTATGCGGCTGAATCAAATTTACCTCCTAGGGCTGTTCGTGAGCCAAGAGTGGTAGTCCAAATTGAGAGTGACGTGGACATACTTGATGATGGTTATCGCTGGCGTAAGTATGGGCAGAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACAAGTGCTGGATGTACGGTGAGGAAACACGTGGAAAGGGCTTCACACAACCTAAAATTTGTGATCACTACATATGAGGGAAAGCACAACCATGAAGTGCCTACTGCTAGAACCAACAATCAGATGAACTCAAGTGATGGTCCGAGTGGTGCTAATGGGCATGTGGCTCTTACACTACCCGGTAGCGCCAGTATTCCAAAGCAAGAAACTCATCAAACTCTTGCACATCATTTTGACAGAAAACCTGATTTTGGCCACGAGTTTCTGAGGCCTGGTTTGGTTGGAAGTTTCGGTACTGATATGAAGTTTGGACCTTCTTCCCTTTGCCAAATGAAGTATCCTTCCTTGAACAACACCATGCCTTATGGCTCCTATGGATTGAACCCTGATCGTTGCGCCGCCCCTCAAGCTGGATCCATCGCCTCAATGTTCCCTGATTTTCCAATGCCACTACCCTTGAATCTTCCTCCATCTGGAAACTTTTCACTTGCTGGACTTAACTTCAACTGTGTAAAACCAATGAATCATGTTCAGTCTTACCTTTCCGGGCAGCAGGTGAAGGACATTGACACAGGATTCCTGAGGCCTAAACAGGAACAGAAGGATGATTCTATATACGGCTCGTGCATTCCAGCACTAGATCATGCAAATGCTTCACTCAGTTCTTCAGCGTCACCATCCATTTATCAACGAGTCATGCAGAATTTCCCTTCATAA 2223 0.4359 MEQDNLNNSNNSDEETFGGGFPPKRSIAERRGFNSNAARINTALFRTSTSTTPSPSPAARSPRLTIPPGISPTALLDSPIMLPNSQAMSPTTGTFFMLPPLTQEGSMLTVEQGSTDMSSVSDVASFKFKFKSLGNLDPNPLPSHYSASRNQVSSNFHSVKGGNRESQLHAQVQPPLDFSFPADFSKGRSMKNSEVHSYNDMKMVNDAIVNSNNVDMQMSGSEEVSDESALPKNAIHGEDFGGQPVSEDQKDTSHATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGAHNHAKPHPSHRASAPSTDEVSDMGEDSTYAKVDNGFIWRNIQSGLKDAKNSLDWKADGQERTSSTSVVTELSDPMSTNKAKSLSMLESEDTPELSSTLASHDGDEDGATQAIVSAEDEAENDESDSKRRKKENYAAESNLPPRAVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKFVITTYEGKHNHEVPTARTNNQMNSSDGPSGANGHVALTLPGSASIPKQETHQTLAHHFDRKPDFGHEFLRPGLVGSFGTDMKFGPSSLCQMKYPSLNNTMPYGSYGLNPDRCAAPQAGSIASMFPDFPMPLPLNLPPSGNFSLAGLNFNCVKPMNHVQSYLSGQQVKDIDTGFLRPKQEQKDDSIYGSCIPALDHANASLSSSASPSIYQRVMQNFPS 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01999 740 MobiDBLite consensus disorder prediction 1 72 - -
Cca07g01999 740 Pfam WRKY DNA -binding domain 263 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01999 740 Pfam WRKY DNA -binding domain 477 534 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01999 740 MobiDBLite consensus disorder prediction 436 451 - -
Cca07g01999 740 ProSiteProfiles WRKY domain profile. 257 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01999 740 Gene3D WRKY domain 463 529 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g01999 740 MobiDBLite consensus disorder prediction 1 16 - -
Cca07g01999 740 MobiDBLite consensus disorder prediction 317 339 - -
Cca07g01999 740 MobiDBLite consensus disorder prediction 35 59 - -
Cca07g01999 740 SUPERFAMILY WRKY DNA-binding domain 260 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g01999 740 MobiDBLite consensus disorder prediction 369 457 - -
Cca07g01999 740 Gene3D WRKY domain 249 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g01999 740 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 715 IPR044810 GO:0003700
Cca07g01999 740 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 7 715 - -
Cca07g01999 740 ProSiteProfiles WRKY domain profile. 471 536 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01999 740 SUPERFAMILY WRKY DNA-binding domain 469 536 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g01999 740 MobiDBLite consensus disorder prediction 372 413 - -
Cca07g01999 740 SMART WRKY_cls 476 535 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01999 740 SMART WRKY_cls 262 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01999 Cca-Chr7 47468870 47473041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01999 1 539 WRKY Transcription Factor Family AT5G56270 42.523 9.60e-102 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca07g01999 WRKY 3.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01999 K18835 - gmx:100800211 1174.07