Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01996 ATGACGGGGAAAGCCAAGCCCAAGAAGCACACGGCCAAGGAGATCGCGGCGAAGGTGGACGCCGCCACCACCAACCGCGGCGGCGGCAAGGCTGGCCTGGCGGACCGCTCCGGCGTGGAGAAAGGGGGCCACGCGAAGTACGAGTGCCCCCACTGCAAGGTAACTGCACCCGATGTTAAGTCGATGCAGATTCACCACGACGCGCGCCACCCCAAGATCCCCTTCGAGGAGGACAAGATCGTCAACCTTCACGCCTCTCACGTGCCAGAGTCCTCCAAGCCGCGCCCCGGCGTTCGCGGAAGCCTCAAGAAGGTGGTGTTGAGTAATCGGGATGTGGGTATGTTCTTGATTTCGGGGAAGAAGGGTTATGATATGATGCATCTTAGGTGTGAATCTGAAGATGCTGTGTATGGAGGGACGGAGAAGGGCTATTTTGGTCTGATGAGATTGATTTTGTAG 459 0.5817 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLADRSGVEKGGHAKYECPHCKVTAPDVKSMQIHHDARHPKIPFEEDKIVNLHASHVPESSKPRPGVRGSLKKVVLSNRDVGMFLISGKKGYDMMHLRCESEDAVYGGTEKGYFGLMRLIL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01996 152 PANTHER - 1 104 - -
Cca07g01996 152 SUPERFAMILY Expressed protein At2g23090/F21P24.15 28 77 - -
Cca07g01996 152 PANTHER GEO09665P1-RELATED 1 104 IPR045230 -
Cca07g01996 152 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01996 Cca-Chr7 47446525 47447084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01996 1 104 C2H2 Transcription Factor Family AT3G02790 75.238 2.66e-54 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01996 - - gmx:100788257 214.157