Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01986 ATGTCCCCTCCTCACCCTCACAGCTACTTCTCCAACCTCGGCCTCGGCTACTCCATCGCCATAGCCCTCGCCTTCCTCTTCCTCCTCTCCACCCTCCTCCTCTCCTCCTACCTCTgctgccgcgcccgccgcaaccgcacccgcgccgccgcccaagccgcctccAGAGCCAGGTCTGCCGACGGCGGGGTCATCCTCCCGCGCGTGATCTTcgtggccgaggacgaggacgaggaggaggagAGCGCCGCCGTGGGGCTGGAGCAGAGCGTCATAAACTCCTACCCGAGGTTCGAGTTCAGTAACAGGGAGGGCGCGCGGAGCAATAACACCACGTGCTCCATTTGTTTGTGCGAGTACAAGGATTCGGAGATTCATCATTCATATTTACCAAAACTGCAAAGGAGAGAATCAGAGGAAGCTCCACACAGTTTTCTTCGGAAGCGTATCGGAAGGGCGAGCTGGTTGAGTTGTATTTGGCATGGAGGAAGCTAG 495 0.4687 MSPPHPHSYFSNLGLGYSIAIALAFLFLLSTLLLSSYLCCRARRNRTRAAAQAASRARSADGGVILPRVIFVAEDEDEEEESAAVGLEQSVINSYPRFEFSNREGARSNNTTCSICLCEYKDSEIHHSYLPKLQRRESEEAPHSFLRKRIGRASWLSCIWHGGS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01986 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 157 IPR013083 -
Cca07g01986 164 PANTHER RING-H2 FINGER PROTEIN ATL67 6 126 - -
Cca07g01986 164 PANTHER RING-H2 FINGER PROTEIN ATL67 6 126 IPR044289 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01986 Cca-Chr7 47337000 47337494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01986 1 124 C3H Transcription Factor Family AT5G07040 35.714 4.81e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01986 - - ccaj:109814698 274.248