Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01972 ATGTACCCCAAAATTCCTGAGGCAAAAGGGTCAATCAGTGCCATTCGAAGTGTGGCCTTCTTCATTCCCTTGTACGAACTTTACCTCACCTATGGTGGGATTTTTAGGTTGACCTTTGGACCAAAGTCCTTTCTGATAGTATCTGATCCGTCCATTGCAAAACACATACTGAGAGACAATTCAAAGGCTTATTCAAAGGGTATCTTGGCTGAGATTCTAGATTTTGTAATGGGGAAAGGGCTCATCCCGGCTGATGGTGAAATATGGCGAGTTAGACGACGAGCCATAGTCCCGGCATTTCACCAGAAGTATGTAGCAGCTATGATTGGCCTTTTTGGACAAGCTGCAGATAGGCTCTGCAAGAAGCTAGATGCTGCAGCATCTGATGGAGAAGATGTTGAAATGGAGTCACTTTTCTCTAGATTGACCTTGGACGTCATTGGCAAGGCAGTATTCAATTATGATTTTGATAGTTTATCAAATGACACTGGTATAGTTGAGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTGCTCCAATTCCAGTATGGGAGATCCCAATATGGAAAGACATATCACCACGTCTAAGGAAGGTTAATGCGGCTCTCAAATTGATCAATGATACGCTTGATGATCTGATAGCAATATGCAAGAGAATGGTAGATGAAGAAGAGTTACAGTTTCATGAGGAGTACATGAATGAAAAAGATCCAAGTATTCTGCACTTCTTGTTGGCGTCAGGAGATGATGTGTCAAGTAAGCAACTTCGTGATGACTTAATGACAATGCTCATTGCTGGACATGAAACATCAGCTGCTGTTTTAACATGGACCTTTTATCTTCTATCCAAGGAGCCTAGAGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCTGTACTTGGAGATCGATTTCCAACTATTGAAGATATGAGGAAACTCAAATATACAACCCGAGTGATCAACGAGTCATTGAGGCTTTACCCACAACCGCCTGTGTTAATTCGTCGCTCTATTGATGAGGATGTTCTTGGAGAGTACCCTATAAAAAGAGGTGAAGATATCTTCATATCTGTCTGGAACCTGCATCGCAGTCCAGAACTGTGGGATAATGCTGATAAGTTTGAACCTGAAAGATGGGCATTAGACGGACCAAACCCTAATGAGACGAATCAAAACTTCAAATATCTTCCATTTGGTGGAGGACCACGGAAATGTGTAGGAGATTTGTTTGCTTCATACGAGACTGTAGTAGCACTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATGGCAGTTGGAGCTCCACCAGTTGAGATGACTACTGGAGCTACAATTCATACGACACAAGGGTTGAAGATGACAGTAACACACAGAATAAAACCTCCTATTGTGCCCTCATTACAGATGTCAACATTGGAGGTTGATCCATCCATAAGCCTTTCTGATAACGATGAAATAAGTCAGAAAGGCGAAATTTATCAGGCTCAGTCCTAA 1503 0.4212 MYPKIPEAKGSISAIRSVAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPAFHQKYVAAMIGLFGQAADRLCKKLDAAASDGEDVEMESLFSRLTLDVIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLRKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVMSKLQEEVDSVLGDRFPTIEDMRKLKYTTRVINESLRLYPQPPVLIRRSIDEDVLGEYPIKRGEDIFISVWNLHRSPELWDNADKFEPERWALDGPNPNETNQNFKYLPFGGGPRKCVGDLFASYETVVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLKMTVTHRIKPPIVPSLQMSTLEVDPSISLSDNDEISQKGEIYQAQS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01972 500 Pfam Cytochrome P450 26 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 SUPERFAMILY Cytochrome P450 19 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
Cca07g01972 500 Gene3D Cytochrome P450 6 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS E-class P450 group I signature 142 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS E-class P450 group I signature 278 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS E-class P450 group I signature 28 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS E-class P450 group I signature 258 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS E-class P450 group I signature 360 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PANTHER CYTOCHROME P450 FAMILY 4 3 464 - -
Cca07g01972 500 PRINTS P450 superfamily signature 399 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PRINTS P450 superfamily signature 269 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01972 500 PANTHER - 3 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01972 Cca-Chr7 47218762 47224975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01972 2 484 Cytochrome P450 AT1G31800 84.568 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01972 K15747 - gmx:100780770 962.985