Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g01950 | ATGACTACTATTTCTTGTATGCCACTTTCCTTTCTTTGTTGCCTCTATGTAATAATGGTAATAACTGAAGCCAGCTTCACACCAGAATACCAAAGAGCCAAAATCTGTTCCAATGAAAATGGGAACTACACAGTGAATAGCACGTACCATAGCAACCTCAAGACCCTCTTATCCACCCTCACTTCCCACACAGAAATCAACTATGGTTTCTACAATTTCTCGTATGGCCAAAACACAGACAAAGTATACGCCATTGGGCTGTGTAGGGGAGATGTTGAGCCAGACGAGTGTCGCACTTGCCTCAACTATTCTAGACTCATTCTCACACAATTTTGTCCAAATCAAAAAGAGGCAATCAAGTGGGAAGCAAAGTGCATGCTGCGCTACTCGAACCGTCCAATATTTCGCACCATGGAAACTGATCCTCCCTTTAGAATGAATAACCTAAACAATGCAACGGATGTGGATGAGTTCAACAAAGTGTTGGGTGAGTTGGTGAGAAGTCTAAGAGGCAAAGCTGCATCAGGTGACTCTCGTCGTAAGTATGACTCGGGCAATGCAGTTGCCGCAAATTTTCAAACCATATACGGTCTTGTGCAGTGTACACCTGATTTGTCAAGCCAAGATTGTGGTGATTGCTTGGACTGGACTATCTCAGAAATCCCTAGAAATTTTAAAGACAAGGTTGGTGTTGTGTTGCTTAAACCCAGTTGTAATGTCAGATTTGAGATTTATCCCTTCTTCGACCATACCACAATATTGGACCCAGTTGTACCACCGGTATCACCTTCACCAAAAGAAAAGGACAACTCATTGCGGATTACAATTACCGTAGTTGTGACTATTTTTCTCGTTCTTCTTGTTGTTCTGCTTATTGTTATTAGCAGATATTTTGGAAGGAAGCAAGCAAGGAAAAATCTTTTGCCTGATGAAGATGAACACGATGAAGAAATTCAAATGGTTGAATCATTGCAATTCGATTTAGACACAATACAAGTTGCAACAAATAACTTCTCAGATTCTAATAAACTGGGAGAAGGCGGGTTTGGAACTGTTTACCAAGGCTTACTCTCTAATGGACAAGGGattgctgtcaaaagactgtcaagcaattctggccaaggagacatggaatttaagaatgaagttcttttattggctaaacttcaacatcgaaatttagttagactacttggtttcagtttggcagggagagaaaaactacttgtttatgaatTTGTTCCTAATAAAAGCCTTGACTACTTCATATTTAATCCAACAAAGAAAGCACAAttggattgggaaaggcgttacaaaatcattagaggtgttgctcgaggtcttctctatcttcatgaggattcaagattgcgcattatacatcgtgatctcaaagcaagtaatgttctcttagatgaagaaatgattcctaagatatcagattttggcatggcaagattAATTGTTGCAGATCAAACACAAGAGAATACAAGTAGAGTTGTTGGAACCTAG | 1512 | 0.3201 | MTTISCMPLSFLCCLYVIMVITEASFTPEYQRAKICSNENGNYTVNSTYHSNLKTLLSTLTSHTEINYGFYNFSYGQNTDKVYAIGLCRGDVEPDECRTCLNYSRLILTQFCPNQKEAIKWEAKCMLRYSNRPIFRTMETDPPFRMNNLNNATDVDEFNKVLGELVRSLRGKAASGDSRRKYDSGNAVAANFQTIYGLVQCTPDLSSQDCGDCLDWTISEIPRNFKDKVGVVLLKPSCNVRFEIYPFFDHTTILDPVVPPVSPSPKEKDNSLRITITVVVTIFLVLLVVLLIVISRYFGRKQARKNLLPDEDEHDEEIQMVESLQFDLDTIQVATNNFSDSNKLGEGGFGTVYQGLLSNGQGIAVKRLSSNSGQGDMEFKNEVLLLAKLQHRNLVRLLGFSLAGREKLLVYEFVPNKSLDYFIFNPTKKAQLDWERRYKIIRGVARGLLYLHEDSRLRIIHRDLKASNVLLDEEMIPKISDFGMARLIVADQTQENTSRVVGT | 503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g01950 | 503 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 459 | 471 | IPR008271 | GO:0004672|GO:0006468 | |
Cca07g01950 | 503 | ProSiteProfiles | Gnk2-homologous domain profile. | 140 | 247 | IPR002902 | - | |
Cca07g01950 | 503 | ProSiteProfiles | Protein kinase domain profile. | 338 | 503 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g01950 | 503 | PANTHER | CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN | 10 | 503 | - | - | |
Cca07g01950 | 503 | Pfam | Salt stress response/antifungal | 36 | 131 | IPR002902 | - | |
Cca07g01950 | 503 | Pfam | Salt stress response/antifungal | 150 | 244 | IPR002902 | - | |
Cca07g01950 | 503 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 10 | 503 | - | - | |
Cca07g01950 | 503 | Gene3D | Transferase(Phosphotransferase) domain 1 | 414 | 503 | - | - | |
Cca07g01950 | 503 | SUPERFAMILY | Protein kinase-like (PK-like) | 319 | 503 | IPR011009 | - | |
Cca07g01950 | 503 | Gene3D | Phosphorylase Kinase; domain 1 | 301 | 413 | - | - | |
Cca07g01950 | 503 | ProSiteProfiles | Gnk2-homologous domain profile. | 31 | 134 | IPR002902 | - | |
Cca07g01950 | 503 | Pfam | Protein tyrosine and serine/threonine kinase | 341 | 496 | IPR001245 | GO:0004672|GO:0006468 | |
Cca07g01950 | 503 | SMART | serkin_6 | 338 | 501 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g01950 | 503 | Gene3D | - | 31 | 133 | IPR038408 | - | |
Cca07g01950 | 503 | Gene3D | - | 143 | 247 | IPR038408 | - | |
Cca07g01950 | 503 | ProSitePatterns | Protein kinases ATP-binding region signature. | 344 | 366 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g01950 | Cca-Chr7 | 46901086 | 46906304 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g01950 | 34 | 503 | Receptor kinase-like Gene Family | AT4G38830 | 48.755 | 2.44e-146 | 432 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Cca07g01950 | PK_Tyr_Ser-Thr | 1.2e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g01950 | - | - | gmx:100775428 | 719.924 |