Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01940 ATGGCTCTTGAGTCAGCTGACATCAGAGGAGTTCCGACTCATGGTGGACGCTATGTTCAGTACAATATCTATGGTAACCTCTTTGAGGTCTCTAGGAAGTATGTTCCTCCTATTCGCCCCGTGGGAAGAGGGGCATATGGTATTGTTTGTGCTGCTGTAAATGCAGAGACCCGTGAAGAAGTTGCCATTAAGAAGGTTGGGAATGCATTTGACAACAGAATAGATGCCATAAGGAATCTACGAGAAATTAAACTTCTTCGGCACATGGATCATGAAAATGTGATAACCCTTAAAGACATTATTCGCCCACCACAGAGGGATAACTTCAACGATGTGTACATTGTTTATGAGTTAATGGATACTGATCTGCATCAAATAATTCGATCTAGTCAACAATTGACTGATGATCATTGTCGGTATTTTCTGTATCAGTTATTACGAGGACTCAAATATGTACACTCAGCAAATGTTCTGCACCGTGATCTAAAGCCTAGCAACTTGCTACTGAATGCCAACTGTGATCTTAAGATTGCAGACTTTGGTCTCGCTAGAACTACATCTGAAACTGATTTCATGACTGAGTATGTGGTTACTCGGTGGTACCGAGCTCCAGAATTACTTCTTAATTGCTCAGAATATACTGCTGCCATTGACATATGGTCTGTGGGTTGCATCCTTGGTGAAATCATAACACGGCAACCCCTATTTCCCGGGAGAGATTATGTTCACCAGCTCAGTCTGATTACAGAGCTCATAGGTTCACCTGATGACACTAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATATGTGAGACAGCTTCCACAATATCCAAGGAAACAATTTGCTGCTAGATTTCCAAGCATGTCTCCTGGTGCTGTTGATTTGTTAGAAAAAATGCTTGTCTTTGATCCAAATAGACGTATCACAGGTAAAAGGATATAA 948 0.4146 MALESADIRGVPTHGGRYVQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETREEVAIKKVGNAFDNRIDAIRNLREIKLLRHMDHENVITLKDIIRPPQRDNFNDVYIVYELMDTDLHQIIRSSQQLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIITRQPLFPGRDYVHQLSLITELIGSPDDTSLGFLRSDNARRYVRQLPQYPRKQFAARFPSMSPGAVDLLEKMLVFDPNRRITGKRI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01940 315 Gene3D Transferase(Phosphotransferase) domain 1 119 312 - -
Cca07g01940 315 Gene3D Phosphorylase Kinase; domain 1 18 118 - -
Cca07g01940 315 SMART serkin_6 35 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01940 315 ProSitePatterns Protein kinases ATP-binding region signature. 41 65 IPR017441 GO:0005524
Cca07g01940 315 ProSiteProfiles Protein kinase domain profile. 35 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01940 315 SUPERFAMILY Protein kinase-like (PK-like) 38 313 IPR011009 -
Cca07g01940 315 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 311 - -
Cca07g01940 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Cca07g01940 315 ProSitePatterns MAP kinase signature. 70 173 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cca07g01940 315 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 311 - -
Cca07g01940 315 Pfam Protein kinase domain 39 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01940 Cca-Chr7 46768019 46774891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01940 4 311 MAP Kinase Gene Family AT4G01370 87.013 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Cca07g01940 Pkinase 1.8e-66 CL0016