Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01919 ATGGATAAAGACAAAACCCCACAACTCCCCAGAAGAATGACCAGGTCTTCAACTTCATCTTCTGTATCCACTTCAAATCACGTAGTTGCAGCAGAAGTAAATAGTCTTGAACCTCTAACGGTCAATGACCTTTTAGTTGTAGGAGATCCCATCAGTCTAGATGATATAATTTCTAGTTTTCCTGGTAGAAGTAGCCAGATTCGTGAGATTATGCGTCTTTTGGGACCTTTGAACTCACCAATGCTTCCTTTGTTTGTATATGGAGGTCCTTCTACTGGAAAAACCAGTATCATTCTTCAATTATTCAGGCATCTCAACCGGCCACTTGTTTATTCTAGTTGCAGGACATGCTATAACCATGGTATCTTGTTTGAATCTATTCTAAATCAGTTACTTCTCCATAGAAAAAATGCTGCCAATGGTTATTCAAATGCAAAACGCTGTGAAAGACCATCTGATTTTGTCAATTTTCTTCGGGAAGCATTGACCAATGTTGTAAACAATCTCAAGAAGTCAGAGAACTCGATCTCGAATAAGATGACAACAAAAGGGAAAATTGGAAATATGATCTACTTGGTGTTTGACAATTTTCAGCTTGTCAGGGAGTGGGAGAAGAGCTCTACTATATTGCCCCTGTTGTTTAATCTCTATGATATGCTAAAGATGCCTGAGGTGGGTCTGATTTTTATCAGCAATACTTCCCCAGATACCTTTTACTCTAACATGGGGTATGTAGAGCCTGTCCCCGTTTACTTTCCGGATTACACAGAAGGTGATATTCGTCAAATATTGTTGAGAAACCAATTGAACCAGAAGCTATATTCCTCATTTCTGGATGTAGCTCTGCATTCTTTCTTTAGAATTACAAGTCAAGTTGGTCAATTGTCTGCTACCTTAAAGCCACTATATGAAAAATATTGTGAACCTTTAAGTGATAAGGGAAAGGGAGTTGCTCATAATTCAGAGATGAATTTGAGGCTGTCAACTCATATCAAGCCTCATATTTCCTCCGCTTTGAATGAGATATTTAAGATTTCATCTCTTGCTTCAACTGAAGCTAAGACCTGCAAGGAGGAAAAGTTGAAGGGAAAATCCAGGAGATCAGAGCAATCAGAAGAACTTGGCAGTCTTGATTTTCACATGTCTACTTGTGCAAAGTATCTTCTGATTTCAGCATTCCTTGCCTCCAGAAACCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAGAGGTGGTTCTGATAATCGAAAGCGAAAGAGGAAGCCCTCTGAGAAAGCACTGGAACGGAAGGAAACTTTAGAAGAGGAACTGCTAATGAAAGGACCTGGAACTTTTCCATTGGAGAGGTTGTTAGCCATTTTTCAGTGCCTTGTATCAGTTGCAGAAGATTCATCTGATGACGACGAACAAAACAATAATGCATTAGGAGTTCAAAGTGGCAACGGCAGTCTAATGTCAGACATTCTTTTGCAGCTATCCAGTCTATGCAATGCTAATTTTATATTCAAAGGAAGAAGCTGTCCGATTGAAGGCTCAACTCGGTATCGATCAACCATATCTGAAGACCTGGCTTTGAAGGTGGCAAGGAGCCTCAAGTTCCCATTATCAAAGTATTTGTATAGAAGTTAG 1629 0.3959 MDKDKTPQLPRRMTRSSTSSSVSTSNHVVAAEVNSLEPLTVNDLLVVGDPISLDDIISSFPGRSSQIREIMRLLGPLNSPMLPLFVYGGPSTGKTSIILQLFRHLNRPLVYSSCRTCYNHGILFESILNQLLLHRKNAANGYSNAKRCERPSDFVNFLREALTNVVNNLKKSENSISNKMTTKGKIGNMIYLVFDNFQLVREWEKSSTILPLLFNLYDMLKMPEVGLIFISNTSPDTFYSNMGYVEPVPVYFPDYTEGDIRQILLRNQLNQKLYSSFLDVALHSFFRITSQVGQLSATLKPLYEKYCEPLSDKGKGVAHNSEMNLRLSTHIKPHISSALNEIFKISSLASTEAKTCKEEKLKGKSRRSEQSEELGSLDFHMSTCAKYLLISAFLASRNPATLDASLFDSRGGSDNRKRKRKPSEKALERKETLEEELLMKGPGTFPLERLLAIFQCLVSVAEDSSDDDEQNNNALGVQSGNGSLMSDILLQLSSLCNANFIFKGRSCPIEGSTRYRSTISEDLALKVARSLKFPLSKYLYRS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01919 542 MobiDBLite consensus disorder prediction 1 24 - -
Cca07g01919 542 MobiDBLite consensus disorder prediction 405 428 - -
Cca07g01919 542 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 541 IPR020796 GO:0000808|GO:0005634|GO:0006260
Cca07g01919 542 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 250 539 IPR020796 GO:0000808|GO:0005634|GO:0006260
Cca07g01919 542 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 271 IPR027417 -
Cca07g01919 542 Pfam AAA ATPase domain 60 216 IPR041664 -
Cca07g01919 542 Gene3D - 60 241 IPR027417 -
Cca07g01919 542 MobiDBLite consensus disorder prediction 410 428 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01919 3 541 Core DNA Replication Machinery Family AT4G29910 58.041 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01919 K02607 - gmx:100784340 868.611