Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01913 ATGGCAAAGAGGTCCCAAAGATTCCCTGTGAATTATGAGAAAGATCAATCAGGATGTATGTGGGGTTTTATTAGTATATTTGATTTTCGCCATGGCCGCTTTACTCGGAAGTTGATAGCAGATAAGAGGCATGGCAGCAAGTATGGTGTTGGTGCTGCACTTACCAAGAACAAATTTGAAGTGTTGAGCGATTTGGATGAAGAATATCAAGACAACTTTGAGAGAGGAGAGAGTAAGAGACTAGTACCGAAAACTGATGCTGATAAGTTTAGTGTGAAGAAACTCATAGAAGAAGAAATGATCATTGATCAGGATGAAATAAAAGATCAAGGTAATGCTGAAGTAGAATCAAAGCAATCCAGATTAGGGCGTGAAGACCCCCCAAAGACAGATTCCAAAAGAAAAAAGAAATCCCGCAAGAAAAGCCGCGATATGGACAACCATAATTTGACTTCTGATGCAACCTTGAAATCTGAAATTTCAAATAACCAGCATTCAAGGCAACCGTCAAAAGATAATCTAGATTTGGACAAAATAATGGATGATTTTTGTCATGTAGAAGCTGCTTGTTCCATGATGCATGACAATGATGGCAAAATTGATGCACAGTCTAACCAAAAGCATGCTATGTCTGAAAACCTTGCTAATGCAATCCATGAATTTGTGAATCAGATGATGATGAATGGGAAAGATCTGCCTGAAGATGGACAATTCCTTAGCTCACGTGAGCTAATGGAAGCACTTCAGGTTATAAGTTCAGATAAGCAATTGTTTCTCAGACTTCTACAAGACCCAAATTCACAGTTATTGAAATACATTCAGGAGTTGGAGAATGCTCAAGGGAGAGGTGACAAAGAATGCAGTTCAGTTACCGGCTCCAACTGTTCTGGACAAGAACTTGTTAATCTGAAACAAACTAGGGAGATTGCCAACCGCAAACATCGTAGCTTTTTCAGGAAAAGGGTGAAGTCTCAGGCAAAAGATCCAACAGATGAAGATGGGAAAACTGAGTTATCAAATAGAATTGTCATCCTGAAACCTGCACTGACAGGCGTGCAAGTTTCTGAAAGCGGAAACAACCTTGCCTCATTGCTAGATTCTCATGATATTGCCCAATACAAAGGTCCTTCTGTGAGAGTTGGTTCACATTTTTCTCTTACAGAGATAAAAAGGAAATTGAAACATGCTATGGGAAAGGAGAGGCATGGAAACCCTGGAGTGATCTCACAAAAGCTCCCTGTTGAATGTCAAAATAAGATGGCAAGAGGAAAATGTAAAGATAATGCTGGAATGAGATCTCCTAATAAAGACCATTTCTTCATTGAAAAAATTGCAAGGCCTATGTTTGATGTTGTGAAAGGAAACAAGACTGGTACATTGAAAGACTCTGAATTGAATGTGGAACATGAAAGTGGTACTCCCATGCAAAGAGTTTCTAACATATATATTGAGGCTAAGAAACATCTGTGTGAGATGCTAGATAGTGCTGATGAGAACACAAACATTTCAAGCAGGCAGATTCCTAAAACCCTTGGCAGAATACTATCTCTTCCTGAGTACAACTTTTCTCCTGTAGAAAGTCCTGGAAGGGATTTGGAGCATCATTTTGTGACTGCACAGGCAAGATTTTCTTCCTCTGACAAAACTAGGGAGGTTAGTGAGGATATTTTGTCCCCCAAACCAGCAACCTTTATTGGTCTTCCAGATCAGAAAACTAACATTTCAGAGAAGCAATCGAGCATTTGTGATGAAAGCTCTAATAATAAAGTCCTAGAAATTAACTCGGTGTCAGATTCCTCCCATGATGTTGGTCATGTTGATACATTCAAAGCCTTCTTTCCTGTTAGAGACGAGATAGTTACTGAAGGTAATGTAGAATCTAAAAAAGAGAAAAATGATTTGGATTCATCTTTGGATCCAAATGGCTTCACCACAGGAGAGGACCAAAATATGGACATCTCAGAAATTCGTGATGGTGCAGGATGTTCTGAATGTTTGAATCAGGACATAACTGAAGAGAATGAACCATCATCCCTACCATCATCTCCTAACTCTTCCATCACTAAGAAAACTGAAGAGCTAGAAAGTGGCACGGATGTATCTGGACGACCAAGTCCTGTATCTGTTCTTGATACATCATTCTCAGATGATGACTTTGGCCCTGGGCACTCCAGATGTCAACCTGTTATATTACCAGTACAACCTCTACAAATTCAATTCGAAGAACACGACTCTTCACCGGAAGAACAATTGGACAGAGGAAATTATTGTCTTGAAGAAAATGATTTGATATATGACTACATCAAAGCTGTCTTGCATGCCTCTGGTTTGACTAGAGATCAAATGTTGATGAAATGCCTTTCCTCAGACAAGATACTAGATCCTTCCTTGTTTGATCAGCATTACTTTGGGGTCTCACCTTGGGTTTCATTTGTAAATCCTAGCATGAGGCCATCTCCAAGTATGAAAAGGCTTATTTTTAAGGTCTGGGAAGGAGTGTGCTGGCACATGCTTCCCTTGCCCCTGCCACGCACTTTAGAGCAAATTGTAAGGAAAGACATGGCAAGAAGGGGAACATGGATGGACCTTGGACTTGACGCTGAAACGATTGGTTTTGACATGGGTGAGACCATTCTCACTGAGCTGATGGAAGACACAATTTTGAGCCTTGCGTGTGAAAGTCCAGAAAGTGAATGTTCAATGCTTCAATTTGAGTTGAAGGACAATAAGAACAACATTCACTTGTAA 2748 0.3999 MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHGRFTRKLIADKRHGSKYGVGAALTKNKFEVLSDLDEEYQDNFERGESKRLVPKTDADKFSVKKLIEEEMIIDQDEIKDQGNAEVESKQSRLGREDPPKTDSKRKKKSRKKSRDMDNHNLTSDATLKSEISNNQHSRQPSKDNLDLDKIMDDFCHVEAACSMMHDNDGKIDAQSNQKHAMSENLANAIHEFVNQMMMNGKDLPEDGQFLSSRELMEALQVISSDKQLFLRLLQDPNSQLLKYIQELENAQGRGDKECSSVTGSNCSGQELVNLKQTREIANRKHRSFFRKRVKSQAKDPTDEDGKTELSNRIVILKPALTGVQVSESGNNLASLLDSHDIAQYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPGVISQKLPVECQNKMARGKCKDNAGMRSPNKDHFFIEKIARPMFDVVKGNKTGTLKDSELNVEHESGTPMQRVSNIYIEAKKHLCEMLDSADENTNISSRQIPKTLGRILSLPEYNFSPVESPGRDLEHHFVTAQARFSSSDKTREVSEDILSPKPATFIGLPDQKTNISEKQSSICDESSNNKVLEINSVSDSSHDVGHVDTFKAFFPVRDEIVTEGNVESKKEKNDLDSSLDPNGFTTGEDQNMDISEIRDGAGCSECLNQDITEENEPSSLPSSPNSSITKKTEELESGTDVSGRPSPVSVLDTSFSDDDFGPGHSRCQPVILPVQPLQIQFEEHDSSPEEQLDRGNYCLEENDLIYDYIKAVLHASGLTRDQMLMKCLSSDKILDPSLFDQHYFGVSPWVSFVNPSMRPSPSMKRLIFKVWEGVCWHMLPLPLPRTLEQIVRKDMARRGTWMDLGLDAETIGFDMGETILTELMEDTILSLACESPESECSMLQFELKDNKNNIHL 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01913 915 MobiDBLite consensus disorder prediction 672 718 - -
Cca07g01913 915 MobiDBLite consensus disorder prediction 672 691 - -
Cca07g01913 915 Pfam Domain of unknown function (DUF4378) 805 885 IPR025486 -
Cca07g01913 915 PANTHER (, RELATED) 1 901 - -
Cca07g01913 915 MobiDBLite consensus disorder prediction 151 169 - -
Cca07g01913 915 MobiDBLite consensus disorder prediction 105 132 - -
Cca07g01913 915 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 901 - -
Cca07g01913 915 Pfam Protein of unknown function (DUF3741) 223 267 IPR022212 -
Cca07g01913 915 MobiDBLite consensus disorder prediction 105 174 - -
Cca07g01913 915 MobiDBLite consensus disorder prediction 624 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01913 Cca-Chr7 46204676 46208723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01913 1 873 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.938 5.59e-95 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01913 - - gmx:100783243 1477.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01913 07 46204676 46208723 Cca07g01913 07 46204676 46208723 ECH
Cca07g01913 07 46204676 46208723 Cca01g02271 01 51032935 51039203 PCT