Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01904 ATGGCAACGGATATGCAGAGACTTGTTGGGACGAGtgaggatgatgaagaaatgggaatggatgtgaaagatgaggatgacgaagatgatgagtacgacgaAAATGGAGGCGAGCAGGGAAATGCTTCAGGGATGGTAGAGATTGGTGGTGGGAATGGGATAGGAACTGCCACTGGTGACCACAGATTTGGGCAGAACCAGCAGTTTCAAGAGCAAGTAGGCACCCCAGGTGGAGGTACTCGAAGATCTAGGCCTCTGGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCGTCGGAGGGCTATCACTGCAAGGATTTTGGCAGGGCTTCGCAGGCATGGCAACTATAATCTAAGAGTTAGGGCTGACATAAATGATGTTATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGCACTACTTTTCCCTCAAGACCTCAGTCTCAGGGTCAAAAGCCAGTTGGTGGTAATTCTACAATTGTCACTTCATCTTCCCATGTGGCTTCACAACAGACTCCTTCTGCTTCTCTCAGGGGAGTTGCTTCTGGCTATAGGAGCCCTTTAGAGTATAATGCATGTCAAACGAAAGGTGTTTTAATGCCAACTCCGTCTCCTTATGATCTATCCTCAAGTTCTCGGTCTCAAACATCAATGGGGGATGGAGAAGCACAAAGAGACAATCGTCCTCTGATTGGTGGTTCAATGGATAACGTTGATGAGAAGCAGATTGCTGACTTGCCCCCCAGGTTAGCAGAGCGTGATTTGGCTGGTACCCCATATGTTCCAGTTTATGTGATGCTACCATTAGGGGTGATCAATATTAAATGTGAGCTTGTTGATCCTGATGGTCTACTAAAGCAGCTGAGGGTGTTGAAATCAGTACATGTTGACGGTGTCATGGTGGACTGTTGGTGGGGAATAGTGGAGGCACATGCTCCGCAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGTGAGCTTAAGCTTAAGCTGCAGGTTATGATGTCATTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCTGACATTTTTTTCACTGATAGAGAGGGAAGACACAACCCTGAATGTCTTTCTTGGGGAATTGATAAGGAACGAGTTTTAAGAGGTCGGACTGCTGTGGAGGTTTATTTTGATTTCATGAGAAGTTTCCGGGTAGAGTTTGATGAGTATTTCGAGGATGGCTTAATATCTATGATTGAAGTTGGACTGGGACCATGTGGAGAGCTAAGATACCCATCTAGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAGTATATGTTGAAAAGCCTTAGGAAAGCAGCAGAAGCACGGGGTCATGCTATTTGGGCTAGAGGGCCAGATAATGCTGGTACCTATAATTCTCAGCCACATGAAACAGGTTTCTTTTGTGATGGAGGAGATTATGATGGCTTCTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTAGTTGATCATGGAAACCGGGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGATCTTGCATTGCTGCAAAGTTATCGGGTATTTACTGGTGGTACAAGACTGCAAGTCATGCTGCTGAATTAACTGCTGGGTATTACAACCCATGCAATCGTGATGGTTATGCTGCAATTATGACAATGTTAAAGAAAAATGGAGTTAGCTTAAACATTCCTTGCGTTGAGCTGCACTCAGGGAACCAACATGAGGGCTTTCCAGAGACATTTGCAGATCCTGAGGGATTAGTATGGCAAGTGTTGAATGCTGGGTGGGATGTTGACCTACCAGTTACCAGTCAGAATGCATTTCCTTGCCTAAACAGGGTTAGCTATAACAAGCTTTTGGATAATGCCAAGCCCATGAATGATCCAGATGGAAGGCATTTTTCATCCTTTACTTACCTGAGGCTTAGTCCACCCCTTATGGAACGACAAAACTTCATAGAGTTTGAACGATTTGTCAAGAGAATGCATGGGGAAGCTGTTCTTGATCTTCAGGTATAA 2109 0.4329 MATDMQRLVGTSEDDEEMGMDVKDEDDEDDEYDENGGEQGNASGMVEIGGGNGIGTATGDHRFGQNQQFQEQVGTPGGGTRRSRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRPQSQGQKPVGGNSTIVTSSSHVASQQTPSASLRGVASGYRSPLEYNACQTKGVLMPTPSPYDLSSSSRSQTSMGDGEAQRDNRPLIGGSMDNVDEKQIADLPPRLAERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLRVLKSVHVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVMMSFHECGGNFGDDVCIPLPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRVEFDEYFEDGLISMIEVGLGPCGELRYPSSPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEARGHAIWARGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLSWYSQVLVDHGNRVLSLAKLAFEGSCIAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIMTMLKKNGVSLNIPCVELHSGNQHEGFPETFADPEGLVWQVLNAGWDVDLPVTSQNAFPCLNRVSYNKLLDNAKPMNDPDGRHFSSFTYLRLSPPLMERQNFIEFERFVKRMHGEAVLDLQV 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01904 702 MobiDBLite consensus disorder prediction 208 226 - -
Cca07g01904 702 MobiDBLite consensus disorder prediction 59 77 - -
Cca07g01904 702 MobiDBLite consensus disorder prediction 17 36 - -
Cca07g01904 702 SUPERFAMILY (Trans)glycosidases 261 698 IPR017853 -
Cca07g01904 702 PRINTS Plant beta-amylase signature 425 434 IPR001371 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Plant beta-amylase signature 668 682 IPR001371 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Plant beta-amylase signature 683 697 IPR001371 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 299 313 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 320 338 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 342 363 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 435 457 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 508 527 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 542 558 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 559 570 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 577 600 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 617 639 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 Pfam Glycosyl hydrolase family 14 268 687 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 PANTHER BETA-AMYLASE 76 702 - -
Cca07g01904 702 Gene3D Glycosidases 255 701 - -
Cca07g01904 702 MobiDBLite consensus disorder prediction 205 242 - -
Cca07g01904 702 PANTHER - 76 702 IPR001554 GO:0000272|GO:0016161
Cca07g01904 702 MobiDBLite consensus disorder prediction 1 96 - -
Cca07g01904 702 MobiDBLite consensus disorder prediction 146 182 - -
Cca07g01904 702 Pfam BES1/BZR1 plant transcription factor, N-terminal 79 218 IPR008540 -
Cca07g01904 702 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01904 Cca-Chr7 46063838 46069909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01904 1 699 Glycoside Hydrolase AT2G45880 65.341 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Cca07g01904 Glyco_hydro_14 2e-102 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01904 K01177 - gmx:100805560 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01904 07 46063838 46069909 Cca07g01904 07 46063838 46069909 ECH