Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01864 ATGCTGTGGTGCTGCTTCTGTTGCTATTATTGTGATTCTAGCTTTTGGGGTttgtgcgttgtgttgtgctttgttgcatcttgtgtgtgttgtgGATTGGTTTTTGGGGTGGAGATGTTGGGTTCAGGTACCAATTTGGTAACCACGGTCATTGGGTTTGGCATGAGTGCCACTTTCATTGTGTTTGTGTGCACCAGAATCATATGTGGAAGGCTTAGAGGGGGTGTTGAATCTCGGATGATGTATGAGATTGAATCAAGAATTGATATAGAACAGCCAGAACATCATGTTAATGACCCTGAATCCGAACCTGTTCTGCTTGATGCAATCCCTACTTTGAAGTTCAACCAAGAGGCTTTCAGTTCGCTTGAACACACACAGTGTGTAATATGTTTGGCAGATTACAAAGAAAGAGAAGTATTGCGCATCATGCCCAAATGTGGCCACACTTTTCATCTTTCTTGCATTGATATATGGCTGAGAAAACAATCTACCTGTCCGGTGTGCCGTCTGCCATTGAAAAACGCTTCCGAAACGAAACATGTGAGACCTGTGACATTTACCATGAGCCAACCTCTTGATGAGTCTCACACATCAGAAAGGAATGAAGATATAGAGAGACATGTTGAACCTAATGCTGCTAGTAATTCTTCACAACCAACTTCAGGAGAACAAGAAGCAAGGCAATGA 690 0.4 MLWCCFCCYYCDSSFWGLCVVLCFVASCVCCGLVFGVEMLGSGTNLVTTVIGFGMSATFIVFVCTRIICGRLRGGVESRMMYEIESRIDIEQPEHHVNDPESEPVLLDAIPTLKFNQEAFSSLEHTQCVICLADYKEREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNASETKHVRPVTFTMSQPLDESHTSERNEDIERHVEPNAASNSSQPTSGEQEARQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01864 229 MobiDBLite consensus disorder prediction 187 229 - -
Cca07g01864 229 PANTHER OS11G0150450 PROTEIN 39 224 - -
Cca07g01864 229 ProSiteProfiles Zinc finger RING-type profile. 128 170 IPR001841 -
Cca07g01864 229 MobiDBLite consensus disorder prediction 196 210 - -
Cca07g01864 229 PANTHER OS02G0676500 PROTEIN 39 224 - -
Cca07g01864 229 SUPERFAMILY RING/U-box 118 176 - -
Cca07g01864 229 MobiDBLite consensus disorder prediction 211 229 - -
Cca07g01864 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 180 IPR013083 -
Cca07g01864 229 Pfam Ring finger domain 127 170 IPR001841 -
Cca07g01864 229 SMART ring_2 128 169 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01864 Cca-Chr7 45598523 45601259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01864 117 173 C3H Transcription Factor Family AT4G10160 54.386 2.80e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01864 - - ccaj:109802319 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01864 07 45598523 45601259 Cca07g01864 07 45598523 45601259 ECH