Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01845 ATGCCTCGTGGGACGCTTGAAGTTATTCTGATAAGTGCAAAAGACCTTCATGACAGTGATTTTTTCGGAAAAATGGATCCTTATGTGATTCTCACTTATCGCGCACAGGAGCACAAAAGCAGTGTTGCAAAAGGTGCAGGATCTACACCTCGTTGGAATGAAAGCTTCCTTTTCACAGTTTCTGACAGTGTCTCTGAACTTAATCTGAGGCTAATGGACAAGGATCGGTTCCGTGATGATTTCATTGGTGAGACAAAAATTGATCTGGAACCAGTGTTTCAAGTAGGGAGCATTCCAGAAACTTCTTACAATGTTGTGAAGAACCAAAAGTACTGTGGGGAGGTTAAGGTGGCAATCACCTTTAATCCTGAGTGGAATTGA 381 0.4226 MPRGTLEVILISAKDLHDSDFFGKMDPYVILTYRAQEHKSSVAKGAGSTPRWNESFLFTVSDSVSELNLRLMDKDRFRDDFIGETKIDLEPVFQVGSIPETSYNVVKNQKYCGEVKVAITFNPEWN 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01845 126 Pfam C2 domain 4 94 IPR000008 -
Cca07g01845 126 PANTHER ELICITOR-RESPONSIVE-LIKE PROTEIN 1 124 - -
Cca07g01845 126 PANTHER C2 DOMAIN-CONTAINING 1 124 - -
Cca07g01845 126 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Cca07g01845 126 SMART C2_3c 5 101 IPR000008 -
Cca07g01845 126 Gene3D C2 domain 2 124 IPR035892 -
Cca07g01845 126 ProSiteProfiles C2 domain profile. 1 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01845 Cca-Chr7 45152297 45155031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01845 4 93 C2H2 Transcription Factor Family AT4G21160 32.967 1.85e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01845 - - gmx:100814819 219.164