Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01824 ATGGCGTCCAACCGCAACGGCGTCCAAAGGGGAAGCGCTAAGTTCGATCGTCCCCTCAAGCCCCGCCTCCGCCCCTCCTCCCCCTCGCCGGGATCCGCCCTTCGCCGCCCCGCCAGAAACTCCCACGCCGTGCCTGGAAGAGTTCGAGTGGCTGTAAGATTGAGACCACGAAATGCTGAAGAAATGATGGCGGATGCTGATTTTGCTGACTGTGTTGAAGTACAACCAGAGCTTAAAAGACTGAAACTTCGTAGAAACAATTGGGATTCGGACACTTATGAGTTCGATGAGGTGCTTACCGAATTTGCTTCACAGAAACGCGTCTATGAAGTTGTGGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGTTACAATGGGACTGTGATGGCTTATGGTCAAACTGGAACTGGGAAAACTTTTACCCTTGGACGACTAGGGGATGGTGATGCCTCTGATCGTGGTATCATGGTTCGTTCCATGGAGGATATTTTTGCCGACTTATCTCCAGATACTGATTTTGTCACAGTCTCGTATCTACAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCAGCAAACGATAATATTCCTATAGTGGAAGACCCAAGAAATGGTGATGTATCTTTGCCCGGGGCAACTCTTGTAGAAATCACAGACCAACAGAGTATTTTGGAGTTGTTAAGAGTAGGGGAAGCTAATCGAGTAGCTGCTAACACAAAATTGAATACCGAATCTTCCCGCAGTCATGCTATTCTGATGGTACATGTTAAGAGGTCTGTTGTGGATAGTGAAGATGTTGTTTCCACTGAAAATAATGATGCCTCTCGCTTGACTAAACTTTCAAAACCAGTCATTCGAAAGAGCAAGTTGGTTGTGGTAGATTTAGCAGGTTCAGAACGTGTCCATAAATCAGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATCTATCAATCTTTCACTTAGTTCACTGGGAAAATGTATTAATGCTCTAGCAGAGAACAATGCTCATGTTCCATTTCGCGATTCAAAGCTCACCAGGATGCTTCGTGATTCTTTTGGAGGCACAGCTAGGACTTCATTGATTGTGACTATTGGCCCATCTCCACGTCACCGAGGAGAGACTTCTAGTACCATATTGTTCGGCCAAAGGGCGATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAATTTGATTATAAAAGCTTATCTCGAAAGCTTGAGATACAATTAGATAAGCTTATTGCTGAAAATGAGAGGCAGCAGAAAGCTTTTGAGGATGAAGTTGAAAAAGTAAATTTGGAGGCACAATGTCGTATTGCTGAGGTTGAGAGGAATTTTGCAGATGCACTAGAGAAAGAGAGACTAAAATGCCAGATGGAGTACATGGAATTGGTTAAGGAGCTGGAGCAGAAGTTGGTGTTGAATCAAGAAAGACATGACTGCAATAATTTTGTGGCTGATAATGGAGAGGGGCCTGCATCATCGTCTGCAGATGAAGTTGCTGAGGCCAAAATGCTGCTTGAAACAGAAAGAAATCGGAGAAAGGCAGCTGAAGAAGAGGTAGAACGTCTAAAAAGTCAGTTGGGGAAACATACGCAAGCAGAGGCAGAAGATGTAGAGATTATAAAGCTTCGCAACATCTTGGAGGATGAGGCTAATCAGAAAAAAAGACTTGAAGAAGAAATAATAATACTACGAAGTCAATTATTGCAATTGAATTTTGAAGCTGATCAGATGAGAAGGTGTTTGGAAAATGGAAGCTCTGGGAGCACATTTTCTGCCACTGATTCCTCCATGACTCAAGTTAGGCATTCCCAATTCAAGGACACTGGGAATGGTCAGAAGTCATCTGTTGCTACACTCTTTGAGCAAGTTGGATTGCAAAAGATTTTGTCTTTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTGGCCAACCTAGCAGCTGAAGAGGCTAATCAAAAGAGAATTGTTGAAGCTGGTGGTCTTAGTTCCTTGCTGATGCTTCTTCGAAGATACGAGGATGAAACTGTTCGCAGAGTAGCTGCTGGGGCTATTGCCAATCTAGCTATGAATGAAGCAAATCAAGAACTTATTATGACTGAAGGAGGAATTACTCTGCTATCAATGACTGCATCAGATGCTGAAGATCCACAAACTCTTCGAATGGTTGCTGGGGCAATTGCTAATCTATGTGGAAATGATAGAATATTGATGACTCTCAGATCTCAGGGAGGTATAAAGGCTTTACTTGGAATTGTGAGATGTGGACATCCTGATGTCCTTTCCCAAGTTGCACGAGGAATCGCTAACTTTGCAAAATGCGAGTCTCGAGCTTCTAATCAAGGGATAAAAAGTGGGAGATCTTTTTTGATAGAAGATGGTGCCCTTCCGTGGATAGTACAAAATGCTAATAATGAAGCAGCACCAATCAGGCGTCACATTGAGCTTGCACTATGCCACTTGGCACAGCATGAAGTGAATGCAAAGGACTTGATTAGTGGAGGTGCTCTTTGGGAGCTTGTTCGGATATCACGAGATTGTTCACGAGAAGACATTCGGAATCTTGCTCGTAGAACTCTGAGTTCTGTATCAACATTCAAATCTGAATTGCGGCGATTGCGTATAGATTATTGA 2658 0.436 MASNRNGVQRGSAKFDRPLKPRLRPSSPSPGSALRRPARNSHAVPGRVRVAVRLRPRNAEEMMADADFADCVEVQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDGDASDRGIMVRSMEDIFADLSPDTDFVTVSYLQLYMETLQDLLNPANDNIPIVEDPRNGDVSLPGATLVEITDQQSILELLRVGEANRVAANTKLNTESSRSHAILMVHVKRSVVDSEDVVSTENNDASRLTKLSKPVIRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINALAENNAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEIQLDKLIAENERQQKAFEDEVEKVNLEAQCRIAEVERNFADALEKERLKCQMEYMELVKELEQKLVLNQERHDCNNFVADNGEGPASSSADEVAEAKMLLETERNRRKAAEEEVERLKSQLGKHTQAEAEDVEIIKLRNILEDEANQKKRLEEEIIILRSQLLQLNFEADQMRRCLENGSSGSTFSATDSSMTQVRHSQFKDTGNGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLSSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMTEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDRILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKSGRSFLIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVNAKDLISGGALWELVRISRDCSREDIRNLARRTLSSVSTFKSELRRLRIDY 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01824 885 Pfam Kinesin motor domain 53 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g01824 885 SMART arm_5 657 698 IPR000225 GO:0005515
Cca07g01824 885 SMART arm_5 741 781 IPR000225 GO:0005515
Cca07g01824 885 SMART arm_5 831 873 IPR000225 GO:0005515
Cca07g01824 885 SMART arm_5 699 740 IPR000225 GO:0005515
Cca07g01824 885 SMART arm_5 617 656 IPR000225 GO:0005515
Cca07g01824 885 Coils Coil 502 536 - -
Cca07g01824 885 PRINTS Kinesin heavy chain signature 123 144 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g01824 885 PRINTS Kinesin heavy chain signature 290 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g01824 885 PRINTS Kinesin heavy chain signature 339 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g01824 885 Pfam Armadillo/beta-catenin-like repeat 660 697 IPR000225 GO:0005515
Cca07g01824 885 PANTHER KINESIN-RELATED 30 877 IPR027640 GO:0003777|GO:0007018
Cca07g01824 885 ProSiteProfiles Kinesin motor domain profile. 47 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g01824 885 PANTHER KINESIN-LIKE PROTEIN 30 877 IPR033291 GO:0008017|GO:0032886|GO:0048364
Cca07g01824 885 Gene3D - 718 882 IPR011989 -
Cca07g01824 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 424 IPR027417 -
Cca07g01824 885 Coils Coil 543 577 - -
Cca07g01824 885 Gene3D - 609 717 IPR011989 -
Cca07g01824 885 Coils Coil 405 469 - -
Cca07g01824 885 MobiDBLite consensus disorder prediction 1 45 - -
Cca07g01824 885 ProSitePatterns Kinesin motor domain signature. 289 300 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca07g01824 885 SMART kinesin_4 45 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g01824 885 SUPERFAMILY ARM repeat 621 878 IPR016024 -
Cca07g01824 885 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 627 669 IPR000225 GO:0005515
Cca07g01824 885 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 668 711 IPR000225 GO:0005515
Cca07g01824 885 Gene3D Kinesin motor domain 38 419 IPR036961 -
Cca07g01824 885 CDD KISc 47 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01824 Cca-Chr7 44842844 44856848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01824 33 436 Calmodulin-binding Proteins AT5G65930 34.123 2.07e-48 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01824 - K10396 gmx:100789455 1552.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01824 07 44842844 44856848 Cca07g01824 07 44842844 44856848 ECH