Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01821 ATGAATAGCGGAAgtggtggtaataataatggtggtggtggtagtggcggtggACATACTGGTAGCCCTTGTGGGGCTTGCAAGTTCCTAAGGAGGAAGTGCGTGTCGAGTTGTATCTTTGCTCCGTACTTTGATTCAGAGCAAGGTACAGCTCACTTTGCGGCCGTGCACAAGGTGTTTGGGGCAAGTAATGTGTCGAAACTCCTTCTCAACATTCCTACTAATAGGAGGCTTGATGCGGTCATCACCATTTGCTATGAAGCTCAGTCAAGGCTTAGAGATCCTGTTTATGGTTGTGTTGCTCACATCTTTGCCCTTCAGCAACAGGTGGCGAACTTGCAAGCAGAACTCTCTTACTTGCATGGCCATCTTACTCATATTGAGGTACCCCACCCATCACCTCCTCCAACGCCGCAGCCAACAGCACCACCGCTTTTCTCAATTGCTGACCTACCGGCCACCGCCACGGCCCCCGCCATACCGGTGACCTATGACTTGTCATCACTTTTTGAGCCAATGGGCCAATCTTCATGGGCCATGCAACAGAGGGGCATGGACCCACGTCACTACATGGGTGGTGGTGCTCCATCAACCACAATCACTCAGTCTCCTCCAACAGCTCCTTCAAGCTCCAATTCATCACCATTACCATCTCTATCACTTTCTAAGTGA 672 0.4747 MNSGSGGNNNGGGGSGGGHTGSPCGACKFLRRKCVSSCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLLNIPTNRRLDAVITICYEAQSRLRDPVYGCVAHIFALQQQVANLQAELSYLHGHLTHIEVPHPSPPPTPQPTAPPLFSIADLPATATAPAIPVTYDLSSLFEPMGQSSWAMQQRGMDPRHYMGGGAPSTTITQSPPTAPSSSNSSPLPSLSLSK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01821 223 ProSiteProfiles LOB domain profile. 22 124 IPR004883 -
Cca07g01821 223 Pfam Lateral organ boundaries (LOB) domain 23 120 IPR004883 -
Cca07g01821 223 MobiDBLite consensus disorder prediction 185 223 - -
Cca07g01821 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 3 196 - -
Cca07g01821 223 PANTHER LOB DOMAIN CONTAINING PROTEIN 3 196 - -
Cca07g01821 223 MobiDBLite consensus disorder prediction 195 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01821 Cca-Chr7 44805022 44808100 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01821 26 192 AS2 family AT2G45420 63.636 3.83e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Cca07g01821 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01821 K21994 - gmx:100790517 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01821 07 44805022 44808100 Cca07g01821 07 44805022 44808100 ECH