Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g01815 | ATGGAAGGAAGAGAAGGGATGAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAGCCTATCAGATGGCACCAAGGAGTGAGGTTCCAAGCCAGGGTGGTCCTGTTCCCCCTGAAGCAGCAACTGGAACTATGGGTGTCTCCCCAGTGAGTGTGGGATTGGATGGAACAGCAGTTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGGCCTGATGGGTCTGTCACTATGGCATTGTCTCCCATGCCAATCTCATCTTCAGCTCCATTTTCTAATGACTTCTCATCTGGGAAGCGGGGGAAGCCGCGGGGGATGGAGTACAAGCTGCAGAAGAAATTTGGAGTGGATCATTTTGGTGACTCTATTGGTACAAACTTTATGCCTCATATCATTACCGTCAATGCTGGTGAGGACATTACTATGAAGGTTATATCTTTTTCCCAACAAGGACCCCGTGCTATATGCATCCTATCTGCTAATGGTGTAATATCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGAACTTTGACATATGAGGGCCGGTTCGAGATACTTTCATTGTCCGGATCATTCATGCCTACTGACAACCAAGGAACAAGAAGCAGGTCCGGTGGGATGAGTGTGTCATTGTCAAGCCCAGATGGTCGTGTCGTAGGTGGTGGAGTTGCTGGACTCCTTGTAGCTGCCGGTCCTGTGCAGGTGGTGGTGGGAAGCTTTTTGCCAAGCAACCATCAAGATCAGAAACCAAAGAAACCAAAGTCCGATTATCCACCAACTACTGTTACACCTGCCATTGCAGTGTCTTCTGCACCACCCCCTACTAATGGCGAAAAAGAGGATGTCATGGGTGGACACCTGCTGCACAACTCAGGAACAACCGTCAACTCAAACCTCACTCCCCCCTCGTCCTTTCGCCGAGATAACTGGGTTAACATGCACTCAATGACCGACTCGATGAAGTCGGCCACTGATATTAACATATCTCTACCTGATAGTTAA | 1008 | 0.4871 | MEGREGMSSGVTVIGAEAPSAYQMAPRSEVPSQGGPVPPEAATGTMGVSPVSVGLDGTAVKKKRGRPRKYGPDGSVTMALSPMPISSSAPFSNDFSSGKRGKPRGMEYKLQKKFGVDHFGDSIGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAAGPVQVVVGSFLPSNHQDQKPKKPKSDYPPTTVTPAIAVSSAPPPTNGEKEDVMGGHLLHNSGTTVNSNLTPPSSFRRDNWVNMHSMTDSMKSATDINISLPDS | 335 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g01815 | 335 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 127 | 247 | - | - | |
Cca07g01815 | 335 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Cca07g01815 | 335 | MobiDBLite | consensus disorder prediction | 243 | 281 | - | - | |
Cca07g01815 | 335 | Gene3D | - | 129 | 260 | - | - | |
Cca07g01815 | 335 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 1 | 334 | IPR039605 | GO:0003680 | |
Cca07g01815 | 335 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 129 | 242 | IPR005175 | - | |
Cca07g01815 | 335 | ProSiteProfiles | PPC domain profile profile. | 124 | 265 | IPR005175 | - | |
Cca07g01815 | 335 | PANTHER | AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN | 1 | 334 | - | - | |
Cca07g01815 | 335 | CDD | DUF296 | 129 | 219 | IPR005175 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g01815 | Cca-Chr7 | 44706310 | 44711688 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g01815 | 6 | 273 | AT-hook Motif Nuclear Localized (AHL) Family | AT4G12080 | 56.623 | 1.31e-97 | 291 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g01815 | - | - | gmx:100777213 | 551.592 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca07g01815 | 07 | 44706310 | 44711688 | Cca07g01815 | 07 | 44706310 | 44711688 | ECH | |
Cca07g01815 | 07 | 44706310 | 44711688 | Cca01g02115 | 01 | 48562623 | 48569220 | PCT |