Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01803 ATGGCTTCTAATTCCTTCAACCTCGTGTTCCTCTTCATCTTCCTCAGTTTCATCAACTCTACAACCACTACCAAGGCACAGGACCCTCCCTCCATGTACCTATACTGCGAAGACAACACCACCAACACCACCTACCTATCAAACCTCAAAACCCTTCTGGCCACACTAGCCAGCAATGCCGCCGCCGGCACCACCTTCCACAACGACACAGTCGAAAACACCGTCTTCGGCCTCTTCATGTGCAGGGGCGACATGGTCCCTCCCCTCTGCGCGCACTGCGTCCAAAACGCCACCACCAAACTCTCCTCCCACCCCGAATGCTCCCACTCCAAAAAGGGCGTAATCTGGTACGACGACTGCATGCTACGCTTCTCCAACGCCACCTTCTTCTCCACAATCGCCACCGAACCCGCCTTCTTCGGCTTCAACATCGCCAACGTCTCCACCAACGAAGCCACCTTCAACCGCCTCGTCTCCGCCGCCATGAAGAAAACCGCCGCGGAAGCCGCCAACTCCGCCCAGGGGAACCTCTACGCGGCGACGCACAAGAGCGTGTCCCAAACCCAGACGCTGTACTGCATGGCGCAGTGCACGCAGGACCTGGGGCGTGGAGATTGCGCCACGTGTCTCTCGGACGCGGTGAAGAAGCTTCCTGCATGCTGCGAAGGAAAGCAAGGAGGGAGAGTTTTGTTTCCAAGCTGCGACGTTAGATACGAACTCTACCCTTTCTACCGCGACGGCTCGTTGACAGAAGACGGAATCATTCCCACAATCGAGTTTCATCAGTTTTCAGAATCATTACCACAATCAGGATACATCTCTCACAACTGCTCCAACAACCAAAACGGCGTCGTCGACAACACCACCTTCAATTCAAATCTCAAATCCCTCCTCTCTGCCCTAACCTCCAACGCCAGCAACGGCGTTGAGTTCCAAATGCGCATGGGAACGCTATACGGTCTCTTCATGTGCCGCGGCGACTTGCCACGCGCGGTTTGCGGAGAGTGCGTTAAAAACGCGTCGCATGCAGTCCTCTCCGCGTGTGGTTTATCGGAGGAGGGTATAATTTGGTACGACTACTGCTTGGTTCGTTACGCGTGTCGGGATATTTTGTCGAGAGTGGAGAGGAGTCCGATGTTTAAGGATGTGAAGGAGTCGGCGAAGGATGTAGTGGAGACAGCGATGATGGAGTTAACGGTTGCGCTGTCGAATAAGTTGGCGGATATGGCGAACCTGACAGGGGACAGCGGCGAGAGGTACCGGTCGGAGACGCTGAGTTTGAACAATGAGCAAAAGTTGTACATTGTGGCTCAGTGCACGAGGGATTTGTCTAGCAGTGAGTGTGGGGGGTGTTTGAGTGATATGATTGGAACGACGATTCCTTGGCGTCGTTTGGGGGATGCTCGTGGAAGGCTTTTGTATCCAAGCTGTGTTCTCAGGTTTGAACCCTATGATTTTTTTTATAAACTGCCTCTGGCCCCGCCACACCCGCAAATTATCACGCACCATCCAGAAAGAAAAAGTTCGTCACGAACAATTATCTTGATCATTGTCGTTCCCACCGTTATCATTTCAGTGATAATGTTCTCTTTTGCCTCCTACTTGATACGAAGAAAAGCAAAGCATTGCAAAGCCATTCTCAAAGAAAATTTTGGAGATGAAAGTAATATTGTAGAGCCACTGCAATTTGATTTGACTATAATCAAAGCAGCAACCAATAATTTTTCATATGAGAACAAGATTGGTAAGGGTGGATTCGGAGAAGTTTACAAGGGCTTTCTTATTGATGGAAGACATATTGCAGTAAAAAAGCTTTCAAGAACTTCTAGACAAGGTGCAGCAGAGTTTAAAAATGAAGTTTTATTAATAGCAAGACTTCAACATCGAAATCTCGTGGAATTCATTGGATTTTGCCTAGATGAGGAAGAAAAAATACTTATCTATGAATACGTGTCAAACAAGAGTCTGAACTACTTCTTATTTGATACTCATGAGCTGCAAAAAGAATTCAGTTGGTCTAAGCGTCACAACATTATAGGAGGGATTGCTCGAGGAATTCTTTATTTACATGAATATTCTCGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAACATATTATTAGATGAAAATATGAATCCAAAGATTTCAGATTTTGGTCTTGCTAGAATTGTTGAAATAGATCAACAAGAAGGAAATACAAACAGAATTATTGGAACGTATGGGTATATGTCTCCAGAATATGCAATGCTTGGACAATTTTCTGAGAAATCGGATATTTATAGTTTTGGAGTTATGGTTTTAGAGATTATTACTGGACAAAAGAATGCCGGTTCATATGAATTATACAATGTTGCTGATGGTCTTTTAAGTTTGGTTTGGAGACAATGGATGGACCAAACACCATTGAACATATTGGACCCAAAGTTGAGAGAAAATTATTGCAAAATGGAAGTCGTTAAATGCATTCAGATTGGTTTATTATGTGTTCAAGAAAATCCAGATGCGAGACCTACAATGTTAGAAATTGTTTCATATCTTAGCAATCACTCGATTGAATTGCCATCTCCACTAAAACCAGCGTTTATTTTACGTAGTAAAATGAATCCAAAAGTAGTTGCACATGAATCAAGTTCTAGCCAATCTGCCAATAATTCTATACCATTCTCTATCAATGAGATGTCAATAAGTGAATTTTATCCTCGATAG 2712 0.451 MASNSFNLVFLFIFLSFINSTTTTKAQDPPSMYLYCEDNTTNTTYLSNLKTLLATLASNAAAGTTFHNDTVENTVFGLFMCRGDMVPPLCAHCVQNATTKLSSHPECSHSKKGVIWYDDCMLRFSNATFFSTIATEPAFFGFNIANVSTNEATFNRLVSAAMKKTAAEAANSAQGNLYAATHKSVSQTQTLYCMAQCTQDLGRGDCATCLSDAVKKLPACCEGKQGGRVLFPSCDVRYELYPFYRDGSLTEDGIIPTIEFHQFSESLPQSGYISHNCSNNQNGVVDNTTFNSNLKSLLSALTSNASNGVEFQMRMGTLYGLFMCRGDLPRAVCGECVKNASHAVLSACGLSEEGIIWYDYCLVRYACRDILSRVERSPMFKDVKESAKDVVETAMMELTVALSNKLADMANLTGDSGERYRSETLSLNNEQKLYIVAQCTRDLSSSECGGCLSDMIGTTIPWRRLGDARGRLLYPSCVLRFEPYDFFYKLPLAPPHPQIITHHPERKSSSRTIILIIVVPTVIISVIMFSFASYLIRRKAKHCKAILKENFGDESNIVEPLQFDLTIIKAATNNFSYENKIGKGGFGEVYKGFLIDGRHIAVKKLSRTSRQGAAEFKNEVLLIARLQHRNLVEFIGFCLDEEEKILIYEYVSNKSLNYFLFDTHELQKEFSWSKRHNIIGGIARGILYLHEYSRLKVIHRDLKPSNILLDENMNPKISDFGLARIVEIDQQEGNTNRIIGTYGYMSPEYAMLGQFSEKSDIYSFGVMVLEIITGQKNAGSYELYNVADGLLSLVWRQWMDQTPLNILDPKLRENYCKMEVVKCIQIGLLCVQENPDARPTMLEIVSYLSNHSIELPSPLKPAFILRSKMNPKVVAHESSSSQSANNSIPFSINEMSISEFYPR 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01803 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Cca07g01803 903 Gene3D Phosphorylase Kinase; domain 1 537 650 - -
Cca07g01803 903 Gene3D Transferase(Phosphotransferase) domain 1 651 855 - -
Cca07g01803 903 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 270 489 - -
Cca07g01803 903 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 502 894 - -
Cca07g01803 903 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 252 - -
Cca07g01803 903 Pfam Protein kinase domain 577 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01803 903 CDD STKc_IRAK 581 848 - -
Cca07g01803 903 ProSiteProfiles Gnk2-homologous domain profile. 135 243 IPR002902 -
Cca07g01803 903 ProSitePatterns Protein kinases ATP-binding region signature. 581 604 IPR017441 GO:0005524
Cca07g01803 903 ProSiteProfiles Gnk2-homologous domain profile. 27 129 IPR002902 -
Cca07g01803 903 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 270 489 - -
Cca07g01803 903 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 18 252 - -
Cca07g01803 903 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 502 894 - -
Cca07g01803 903 SUPERFAMILY Protein kinase-like (PK-like) 558 881 IPR011009 -
Cca07g01803 903 Pfam Salt stress response/antifungal 418 483 IPR002902 -
Cca07g01803 903 Pfam Salt stress response/antifungal 149 241 IPR002902 -
Cca07g01803 903 Pfam Salt stress response/antifungal 36 126 IPR002902 -
Cca07g01803 903 Pfam Salt stress response/antifungal 277 366 IPR002902 -
Cca07g01803 903 ProSiteProfiles Gnk2-homologous domain profile. 272 370 IPR002902 -
Cca07g01803 903 ProSiteProfiles Gnk2-homologous domain profile. 378 486 IPR002902 -
Cca07g01803 903 SMART serkin_6 575 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01803 903 Gene3D - 31 129 IPR038408 -
Cca07g01803 903 Gene3D - 387 486 IPR038408 -
Cca07g01803 903 Gene3D - 140 243 IPR038408 -
Cca07g01803 903 Gene3D - 269 369 IPR038408 -
Cca07g01803 903 ProSiteProfiles Protein kinase domain profile. 575 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01803 Cca-Chr7 44518207 44524353 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01803 272 903 Receptor kinase-like Gene Family AT4G05200 40.813 2.59e-165 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca07g01803 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01803 - - gmx:100806248 1139.41