Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01801 ATGCTTTCCAATTTCTTCAACCCCATCTTCCTTTGTATCCTTATTAGCCTTTTCAATTTCCCAACCACCAAAGCACGGGACGCCACCGATGCTATTGGCTATGTGTGTAGTATAAACAACGAATCCAGTGCCAACAGCGCCTATGAAGAGAACCGCCGGATCCTGCTGTCTTCCTTATCTTCGAAGGCCACCCACAAGACATTCTACAACGACACAGTGGTGGGAACAAACTCATCTGACACTGTATATGGCATGTTCATGTGCAGGGGCGATATCGACCTAGCCTCTGACCTCTGCATACAGTGCGTGGGGAACGCAACCAACAAACTATTCTCAGATTCAGTTTGTTCCTCCTCCAAAGTGGCTGTCACTTGGTACGATAACTGCATGGTTCGGTATTCCAACGTTAGTTTCTTCTCCACAATGGACACCGATCCCGGAATTTCCCTATCCAACGGGGCTAACATCTCCTCCGACGCAGAAATCTTCAATAATTTGTTGGCCAACACCATGAGGAACACTGCAAATGAAGCAGCGAATACTAGCAATAGGTACTCCACAAAGGAAGCAATTTTATCTCAATATCAGACTCTCTATTGTCTTGCTCAGTGCACACAAGATCTGTCAACCCAAAACTGCAGTGACTGTCTTGAATATGCCATATCGTCTATTCCAGGCTGCTGTGATGGAAAGATGGGAGGGAGAGTTCTGTTTCCCAGTTGTAACATTAGGTATGAACTGTACCCTTTCTACAACAACATCACGGATGAGGAACCACAAGGACTGGTTCCTGAAACAAAGTATTCACACACAGATTCTGAATATTCCGAAGATCCTGGCTATATTTTCCACAACTGCTCAACCAACAAAAAGTTGAACGACAATGGTTTCCAATCAGACATCGAGACCCTCTTCTCTGACATGGCTTCCAACGCCAGCGGTGGCGGTGGCAATAAATACAAGATACAATCGGGAACAGTGCAAGGACTGTTCACGTGTCGTGGCGACCTTTCTCCTAGGCTGTGTGAGCAATGCGTCCGAAACGCAACGGAGAAAATAGCCTCTGACTCCGAGTGTGATTTATCTACGGAAGGTGTGATTTGGTACAACCACTGCTGGCTTCGCTACTCCACTCGCTCCTTAACATTGGAAACAAGTCCGAGGTTTGTGGATTTGAATCTCAGCGACTCCCATCCCTTGCAAACGTCTGTTGCCAGTAAACTGTCGAATAAAATAGCTGCGATAGCGAACGACACGGGGGACATTGGTAACAAATACCAAACTCAAACATTAGTGTTGAATGATAAACAAACGGTGTATATTGTTGCTCAATGCACGTTGGATCTCTCTAGCACCGATTGCGGTGGCTGCCTAAATGATGTCATTGGTTCAGCCATTGTATGGGCTCGTTTGGGAAGCGTAGGTGGACGAGTTCTGTATCCTAGCTGTATTCTACGCTTTGAAATGTTCAAGTTTTACGATTTGACTGCCTCTCCACCACCGCCACCGCCAGGGAAAGGCCGGTCACGAACTATTATCGTAATCATTTTCCCTACCATTATTGTATCGGGGATACTTTTTACTTTTTGTTGCTATTTGATCCGAAGAAAAACAAGAAAGAATAATAAAGTTATTCTTAGAGAAAATTTTGGACATGAAAGTTCTACTATAGAGTCATTGCAATTCAATTTAGCAATAATTGAAGCAGCCACAAATAACTTTTCGAATGAAAACAAGATTGGGAAAGGTGGATTTGGAGAAGTTTATAAGGGTGTTCTTATTGATGGAAGACATATAGCTGTAAAGAGACTCTCAAGAAATTCTAAGCAAGGTGTAGAGGAGTTCAAAAATGAAGTTTTATTAATAGCCAAGCTTCAACATAGAAATCTAGTGGCATTCATAGGATTTTGTATTGACGAACAAGAGAAAATACTTATCTATGAATACGTGCCAAACAAGAGTCTGGACTATTTCTTATTTGATACTGAATTAGAAAAGGTTTTGAGGTGGTCTGAGCGTTACAAAATTATACAAGAGATTGCTCGAGGAATTTTATATTTACATGAACATTCTCGACTTAAAATCAACAAGAAGGAAGTACAAAGAGAGTTATTGGAACATAATGTTTACAGTTTTGGGGTTATGATTTTTGAGATTATTAGTGGAAGAAAGAACCTAGGTTCATATGAGCCACACCATGTTGATGATGGTCTTCGAAACTTTGTTTGGAGACACTGGATGAATGAAACACCATTGAACACATTGGACCCAAAATTAAAAGAAGATCATTCTCACATTGAAGTCATTAAATGTATTCAAATTGGTTTATTATGTGTTCAAGATTATCCAAATGATAGACCTTCGATGATGACAATTGTCTCATATCTCATTAGTAACTTAGTTGAATTGCCTTCTCCAAAAGAACCGACATTTTTCTTGCATAATAAAATGGATCCAATTGTTGCACATGCAAGTTCGAGGCGAATTACCAACTATTCCACATCATTCTCTATCAATGAAATGTCTATGAGTGACATTTATCCTCGATAA 2550 0.4106 MLSNFFNPIFLCILISLFNFPTTKARDATDAIGYVCSINNESSANSAYEENRRILLSSLSSKATHKTFYNDTVVGTNSSDTVYGMFMCRGDIDLASDLCIQCVGNATNKLFSDSVCSSSKVAVTWYDNCMVRYSNVSFFSTMDTDPGISLSNGANISSDAEIFNNLLANTMRNTANEAANTSNRYSTKEAILSQYQTLYCLAQCTQDLSTQNCSDCLEYAISSIPGCCDGKMGGRVLFPSCNIRYELYPFYNNITDEEPQGLVPETKYSHTDSEYSEDPGYIFHNCSTNKKLNDNGFQSDIETLFSDMASNASGGGGNKYKIQSGTVQGLFTCRGDLSPRLCEQCVRNATEKIASDSECDLSTEGVIWYNHCWLRYSTRSLTLETSPRFVDLNLSDSHPLQTSVASKLSNKIAAIANDTGDIGNKYQTQTLVLNDKQTVYIVAQCTLDLSSTDCGGCLNDVIGSAIVWARLGSVGGRVLYPSCILRFEMFKFYDLTASPPPPPPGKGRSRTIIVIIFPTIIVSGILFTFCCYLIRRKTRKNNKVILRENFGHESSTIESLQFNLAIIEAATNNFSNENKIGKGGFGEVYKGVLIDGRHIAVKRLSRNSKQGVEEFKNEVLLIAKLQHRNLVAFIGFCIDEQEKILIYEYVPNKSLDYFLFDTELEKVLRWSERYKIIQEIARGILYLHEHSRLKINKKEVQRELLEHNVYSFGVMIFEIISGRKNLGSYEPHHVDDGLRNFVWRHWMNETPLNTLDPKLKEDHSHIEVIKCIQIGLLCVQDYPNDRPSMMTIVSYLISNLVELPSPKEPTFFLHNKMDPIVAHASSRRITNYSTSFSINEMSMSDIYPR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01801 849 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Cca07g01801 849 Pfam Protein tyrosine and serine/threonine kinase 576 690 IPR001245 GO:0004672|GO:0006468
Cca07g01801 849 Gene3D Phosphorylase Kinase; domain 1 535 649 - -
Cca07g01801 849 Gene3D Transferase(Phosphotransferase) domain 1 705 803 - -
Cca07g01801 849 ProSiteProfiles Gnk2-homologous domain profile. 385 492 IPR002902 -
Cca07g01801 849 SUPERFAMILY Protein kinase-like (PK-like) 554 796 IPR011009 -
Cca07g01801 849 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 271 494 - -
Cca07g01801 849 Gene3D - 391 492 IPR038408 -
Cca07g01801 849 Gene3D - 279 380 IPR038408 -
Cca07g01801 849 Gene3D - 148 250 IPR038408 -
Cca07g01801 849 Gene3D - 28 138 IPR038408 -
Cca07g01801 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 260 - -
Cca07g01801 849 ProSiteProfiles Protein kinase domain profile. 574 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01801 849 ProSiteProfiles Gnk2-homologous domain profile. 144 250 IPR002902 -
Cca07g01801 849 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 708 835 - -
Cca07g01801 849 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 32 260 - -
Cca07g01801 849 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 502 697 - -
Cca07g01801 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 708 835 - -
Cca07g01801 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 502 697 - -
Cca07g01801 849 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Cca07g01801 849 Pfam Salt stress response/antifungal 286 378 IPR002902 -
Cca07g01801 849 Pfam Salt stress response/antifungal 416 488 IPR002902 -
Cca07g01801 849 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Cca07g01801 849 ProSiteProfiles Gnk2-homologous domain profile. 30 138 IPR002902 -
Cca07g01801 849 ProSiteProfiles Gnk2-homologous domain profile. 279 381 IPR002902 -
Cca07g01801 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 271 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01801 Cca-Chr7 44462036 44501518 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01801 276 849 Receptor kinase-like Gene Family AT4G05200 36.199 3.79e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca07g01801 PK_Tyr_Ser-Thr 5.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01801 - - ccaj:109818428 1152.5