Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01793 ATGGAAGCAGAAGGGCAATGGCAGATTTCAGAGAAAGCTGTGAAAGAGATATGCTGTTCGGTGGTGTTCATAGCGGCATGGAGCATCATAACATTAGTATATGTGAAGCTGTGGCATAAGCCTCAAAGGATCAGATCAGTGCTTCAGAAACAAGGCATCAATGGACCAAAGCCTTCATTCCCCTTTGGCAACGTTGCTGAGATGCAAAAGTTACAGGCCAAACAAGATTCTCCCGTTTCTCTTGAAGCCTTAGATGATTGGACTTCTTCCCTCTTCCCATATTTCCACACATGGAGGCAACGCTACGGTCCTTTGTTCATGTACTCCACTGGAACCAAACAGCATCTATATGTGGAGATACCAGAGTTAATAAAATGGATAGGTCTGAACAAGTCCTTGGAACTAGGCCGGCCATCGTATCTAACTAAAACATTGAAGCCTTTGCTGGGAAACGGCATCCTTAGGTCTAATGGACTAAACTGGGCCTTTCAAAGGAATCTACTTGCTCCTGAGTTTTTCCAGAGCAAAATTAAGAATTGGGTGGATATAATGGAAGAATCTACCATGGAGATTATCCAAAAATGGGAGAGCCTTATAACCGAAAGTGAAGGGGGTGTTGCAGAGTTGGTTATTGATGGAGATATGAAGGCTCTTACAGCGAATATCATTTCCAAAGCTTGTTTTGGTAGCACTTACGCTCAAGGCAATTTAATTTTTGCAAAATTGGCCAAAATGCAAAATGCACTAGCAAAGCCTAGTATTCTATTTGGATTTCTAAACCTAAGGTTTCTTCCTACCAAGGAAAACAAAGAGATATGGAAGCTACAAAAAGAGGTGGAAACAATGATACTAAAAGTGATCAAAGACCGTGAATCAGAAAATCAGAAGAGTAACACACATGGGAATCAAAAGGACATGTTACAAGTAGTTCTAGAAGGTGCTGCCAATGCCACCAGTGACAGCAGTGGAAAGGGTATTTTCGAAGCAGGGTATAACTTAGAACAATTGATTCTAGATATCTGCAAAAACATGTACTTTGCAGGCTCTGAGAGCAGTGCTCTTGCAACTATTTGGACACTGCTGCTACTTGCCTTACATCCTGAGTGGCAACAACGCGTTAGATCTGAGATTATGGACACCTTTGGTACCATGTTGCCTCATTCCTTACATGACATGGACAAACTTCGAAACTTGAAAGCACTAACAATGGTGATTCAAGAGAGTTTACGTCTGTATGGCCCCGCAGTTACAGCCGCAAGGGAAGTGATGTCTGAGATGAAATTAGGAGAACATGTGCTCCCCAAAGGCATCAACATGTGGCTATTCTTACCCTCATTGCACCGTGACCCTGATAACTGGGGGCCTGATGCTAAGGAGTTCAAGCCAGAAAGGTTTGCTGGTGGTGTTTCTGCAGCATGCAAGTATCCACAAGCTTATGCACCATTTGGCCTCGGGAGTCGAATTTGCTTAGGCCAAAACTTTGCCCTGCTCGAAATCAAGCAAGTGTTGTGCCTTCTTCTATCCAAGTTCTCCTTTGCTGTTTCACCAAACTATCGCCATTGCCCTGTGTATAGAATGTTGTTGATACCGAAATATGGAGTGAGCCTTCTTGTCAGCAAGGTTCACAAGAACGTGGCGTAG 1641 0.4333 MEAEGQWQISEKAVKEICCSVVFIAAWSIITLVYVKLWHKPQRIRSVLQKQGINGPKPSFPFGNVAEMQKLQAKQDSPVSLEALDDWTSSLFPYFHTWRQRYGPLFMYSTGTKQHLYVEIPELIKWIGLNKSLELGRPSYLTKTLKPLLGNGILRSNGLNWAFQRNLLAPEFFQSKIKNWVDIMEESTMEIIQKWESLITESEGGVAELVIDGDMKALTANIISKACFGSTYAQGNLIFAKLAKMQNALAKPSILFGFLNLRFLPTKENKEIWKLQKEVETMILKVIKDRESENQKSNTHGNQKDMLQVVLEGAANATSDSSGKGIFEAGYNLEQLILDICKNMYFAGSESSALATIWTLLLLALHPEWQQRVRSEIMDTFGTMLPHSLHDMDKLRNLKALTMVIQESLRLYGPAVTAAREVMSEMKLGEHVLPKGINMWLFLPSLHRDPDNWGPDAKEFKPERFAGGVSAACKYPQAYAPFGLGSRICLGQNFALLEIKQVLCLLLSKFSFAVSPNYRHCPVYRMLLIPKYGVSLLVSKVHKNVA 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01793 546 Pfam Cytochrome P450 91 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 SUPERFAMILY Cytochrome P450 87 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 Gene3D Cytochrome P450 38 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS P450 superfamily signature 480 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS P450 superfamily signature 489 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS E-class P450 group I signature 336 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS E-class P450 group I signature 356 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS E-class P450 group I signature 479 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PRINTS E-class P450 group I signature 489 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g01793 546 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 536 - -
Cca07g01793 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 482 491 IPR017972 GO:0005506|GO:0016705
Cca07g01793 546 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01793 Cca-Chr7 44377974 44381491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01793 123 538 Cytochrome P450 AT5G24900 42.381 1.91e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01793 - - gmx:100801472 911.753