Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01783 ATGAGCGAAGAACGGGAACGAAATCTTAATGCTCCCAAACAATGGCGTCACGTGTTGGCTGCGAAATCTGCACAAAATCTGAACGAAATCTGTGATCTGTCCAATAATCGTCTCAACGGATCTATTCCTCGAAGCTTCTCATATCCTCATCTTCAAAACTTGTCACTTGCAAACAATTTACTGTCTGGCTCCGTCCCTGCTAGCATATGGCAGAACATGTCCTTTAATGAGAAAGCTAAACTTACAATTGATCTCCATAACAACTTATTTTCGGATGTTTTAGGAAATCTAACCCCCCCGGAAAATGTTACCTTGAGGCTTTCTGGTAATCCTATCTGCAATAATTCTAACATACATAGTATTGGTCAATATTGTGGACCTAAAGAAGATAAGGCAGAACAAGACTCAACAAACTCAACAACTGGTTGTCCGATTCAAGCTTGTCCAGTAAAGGCCTTTTATGAATATGCCCCATCTTCCTCAGTTCAATGCTTTTGTGCAGCACCTCTAAGAATTGGATACAGGCTGAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTATAAAACTAGTTTTGAACACTATATAGTTAAATCCTTAAACTTAGACCACGATCAACTATCAATAGATTCATATGCTTGGGAAGAGGGGCCTCGTCTTAGAATGTATTTGAAACTCTTCCCTTCCTATAATGATTCCCATTCTTACATGTTCAATACAAGTGAGGTCCGTCGTATTAAAGGGTTATTTTCATCATGGCACTTTCCTCGCACTGATTTTTTCGGACCATATGAACTCTTGAACTTCACTCTTCTTGGACCTTATGAAGATTTACTTAATGATTCAGAGAAGAAAAAGATTGGCACGGGCATAATAATTGCGGCTGTAATAGCAGCAGTTGCTTGTGTTTTAGCAATATCTGCAATAATCATTCTCCTGATGTCTAGAAGACATAAGAAATACCAGCACAAGTTTTCCAGGAAACGGATGTCCTCTAATATGTCAATCAAAATAGATGGAATGAAAATATTTACTTACAAAGAATTGGCTCTTGCTACTAAAAAATTTGATATCTCAACTAAAGTTGGCCAAGGAGGTTATGGGAATGTCTATAAAGGCATTTTATCTAATGAAACTTTTGTGGCCGTTAAGCGAGCAGAAGAAGGTTCCTTACAAGGACAAAAAGAGTTCTTGACTGAGATTGAGCTTTTATCAAGATTACATCATCGAAATCTTGTCTCACTGATTGGATACTGTAATGAAGAAGGAGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGACTGGATTTCTGGTAAAAGTAAAAAAAACAAGGGAAGCCTAAATTTTACTATGAGGTTGAGAATTGCAATGGGTGCAGCCAAAGGAATACTATATCTGCATACAGAGGCTAACCCTCCTATATTCCACCGAGATATTAAAGCCAGTAACATTCTTCTGGACTCCAAGTTTACTGCTAAAGTGGCCGATTTTGGACTTTCACGGCTTGTACCATACTCAGATGAAGAAGGAACTGCTCCTAATTATGTGTCAACAGTGGTGAAAGGAACACCAGGTTACCTTGACCCAGAATATTTGTTGACTCATAAGTTGACTGACAAAAGTGATGTCTATAGCCTGGGCATTGTGTTTCTAGAGCTTTTGACAGGCATGCAACCAATATCACATGGGAAAAACATTGTCCGCGAGGTTAACATGGCTCTACAATCTGGCACAATATATTCCATCATAGACAGCAAAATGGGTTTATATCCATCTGAATGCTTGGACAAGTTTTTAACTCTGGCCCTCAGTTGTTGCCAAGACAATCCAGAGCAGAGACCATCAATGCTAGATGTAGTGAGGGAACTGGAAAACATCATTGCAGTATTGCCTGAAACCGAAACTCTTTTCTCAGATGTTAGCTTAGACAGTTCTGGTAACATGGCATCTTCATCATCAGCATCAGGATCCCATATTACAAGAGAGGAACAACACATGTCCTCGTATGTGTCAGGAAGTGATCTTGTCAGTGATGTCATTCCCACCATTGTTCCTCGCTGA 2073 0.3956 MSEERERNLNAPKQWRHVLAAKSAQNLNEICDLSNNRLNGSIPRSFSYPHLQNLSLANNLLSGSVPASIWQNMSFNEKAKLTIDLHNNLFSDVLGNLTPPENVTLRLSGNPICNNSNIHSIGQYCGPKEDKAEQDSTNSTTGCPIQACPVKAFYEYAPSSSVQCFCAAPLRIGYRLKSPSFSYFPPYKTSFEHYIVKSLNLDHDQLSIDSYAWEEGPRLRMYLKLFPSYNDSHSYMFNTSEVRRIKGLFSSWHFPRTDFFGPYELLNFTLLGPYEDLLNDSEKKKIGTGIIIAAVIAAVACVLAISAIIILLMSRRHKKYQHKFSRKRMSSNMSIKIDGMKIFTYKELALATKKFDISTKVGQGGYGNVYKGILSNETFVAVKRAEEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEGEQMLVYEFMPNGTLRDWISGKSKKNKGSLNFTMRLRIAMGAAKGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSRLVPYSDEEGTAPNYVSTVVKGTPGYLDPEYLLTHKLTDKSDVYSLGIVFLELLTGMQPISHGKNIVREVNMALQSGTIYSIIDSKMGLYPSECLDKFLTLALSCCQDNPEQRPSMLDVVRELENIIAVLPETETLFSDVSLDSSGNMASSSSASGSHITREEQHMSSYVSGSDLVSDVIPTIVPR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01783 690 SUPERFAMILY L domain-like 32 113 - -
Cca07g01783 690 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01783 690 CDD STKc_IRAK 361 630 - -
Cca07g01783 690 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 26 663 - -
Cca07g01783 690 Gene3D Transferase(Phosphotransferase) domain 1 431 640 - -
Cca07g01783 690 SUPERFAMILY Protein kinase-like (PK-like) 340 657 IPR011009 -
Cca07g01783 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Cca07g01783 690 Gene3D Phosphorylase Kinase; domain 1 324 430 - -
Cca07g01783 690 Pfam Protein kinase domain 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01783 690 Gene3D Ribonuclease Inhibitor 16 151 IPR032675 -
Cca07g01783 690 SMART serkin_6 355 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01783 690 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 663 - -
Cca07g01783 690 MobiDBLite consensus disorder prediction 648 667 - -
Cca07g01783 690 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01783 Cca-Chr7 44273169 44279706 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01783 32 639 Receptor kinase-like Gene Family AT5G01950 61.275 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Cca07g01783 Pkinase 6.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01783 - - ccaj:109788950 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01783 07 44273169 44279706 Cca07g01783 07 44273169 44279706 ECH