Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01781 ATGGAACATGGGAGCAGGGGGACTAATTATGATGAGTCATATTTATTTACATGCTGCCAGCTTGATAACAACAATTTCAGCGGGAGTGGAATTCCTTTAACATATGCAAACTTAACCATGCTAGTGAAATTAAGTCTGAGAAACTGCAGTCTGCTAGGAACTATTCCTGATTTCAGTTCAATAGCGAACCTTAGCTATTTGTCACTTGAGAACAATTTACTGTCTGGATCCATCCCTGCTAGCATATGGCAGAACGGGGCCATCAATTCTAAAGATAAACTTACAATTAACCTCCAAAACAACTCGCTATTGGATGTTTTGGGAAATCTGAACCCCTCGAAAAATGTTATCTTAAGGCTTTTTGGCAATCCAATCTGCAAGGATTCTAACATAGAAAGTATTGGTCAATATTGTGGACCTGATGGAGATGGAGATGATGAAGTAGCACAAAACCCAACAAATCCAACAAATGTATGTTCAATTCAAGATTGTCAACCGGATAATGAATATGTACCCCTTTCCCCAGTTCCTTGCTTTTGTGCAGCACCTCTGAGAATTGGATACAGGCTTAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTATATAACTAGTTTTGAATTATATATAACTGAGTCCTTAAAATTAGACAACTATCAGTTATCAATAGATGCTTGGAAAGATGGATATCGTATCACCATGTATCTAAAACTATTTCCGTCATACAATGATCCCAACCATATGTTCAATGCAAGTGAAATCCATCGCATTAAAACCATATTTGCATCGTGGCGATTTCCTCCCAATCATTTTTTTGGACCACATGAACTCCTCAACTTCACTCTTCTCGGACCTTATGCAAATGATTCGAAGAGGAGTAAAAGTAGTACAGATATAGATATATTAGTTGCTGTCTTAATAGCAGCTGTTGCTTGTGTTTTAGCAACATCTGCTATAATCATTCTCCTGGTTTTTATAAGACATGGCAAATACCAGCGCATGATATCCAAGAAAGCCCCCAATGTATCTATTAAACTAGACAACGTTAAAGAATTTAGTCTCAAAGAATTGGCTCTTGCTACAAACAATTTTAGCAGCTCAACTAAAGTTGGCCAAGGAGGTTATGGGAATCACTCACAAACACTTGTGGCCATTAAACGAGCAGCAGAAGGTTCCTTACAAGGCCAAAAAGAGTTTTTGACTGAGATTGAACTTTTATCAAGATTACACCATCGAAATCTTGTCTCTCTCATTGGATATTGTGATGAAGAAAAGGAACAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGACTGGATTTCTGGTAAAAATGAAGAAAGCAAGGAAAGACAAAATTTTGGTATGGGGTTGAAAATTGTCAAGGGTGCAGCCAAAGGCATACTATATCTGCATACAGAAGCTAACCCTCCAATATTCCACCGAGATATAAAAACCAGCAACATACTTTTGGACTCCAAATTTACAGCTAAAGTGGCTGATTTTGGACTGTCACGTCTTGCACCATATGAAGAAGGAAGTGGTACCAAGTACTTGTCGACAGTTGTGAAGGGAACACCAGGTTACCTGGACCCAGAATATGTGTTGACTCATAAGTTTACCGACAAAAGTGATGTCTATAGCCTAGGAGTTGTGTTTCTTGAGATTTTGACGGGCATGCAACCAATATCACGTGGGAAACACATTGTTAACGAGATTAAAGTGGCTTGTCGGTCTGGCATGATATATGCCACCATAAAGAGCAAAATGGGTTTATACCAATCTGATTGCTTGGACAAGTTTTTAACTCTGGCCCTCAGTTGTTGCCAAGACAATCCAGAAGAGAGACCATCAATGCTAGATGTGGTGAGGGAACTTGAAGATATTGTTGCAATGTTATTAGAAAGTGACACTAGTTACCCAGATGTTACCTTCGATAATTCAGGTCAAATGGTACCCTCATCATCTTTAGGATCTAATGTGGCAAGAGAGGACCAACACAAGTATGCTTATGTGTCTGGAAGTAATCTTGTCAGTGATGTCATTCCCACCATTGTTCCTCGCTGA 2070 0.3913 MEHGSRGTNYDESYLFTCCQLDNNNFSGSGIPLTYANLTMLVKLSLRNCSLLGTIPDFSSIANLSYLSLENNLLSGSIPASIWQNGAINSKDKLTINLQNNSLLDVLGNLNPSKNVILRLFGNPICKDSNIESIGQYCGPDGDGDDEVAQNPTNPTNVCSIQDCQPDNEYVPLSPVPCFCAAPLRIGYRLKSPSFSYFPPYITSFELYITESLKLDNYQLSIDAWKDGYRITMYLKLFPSYNDPNHMFNASEIHRIKTIFASWRFPPNHFFGPHELLNFTLLGPYANDSKRSKSSTDIDILVAVLIAAVACVLATSAIIILLVFIRHGKYQRMISKKAPNVSIKLDNVKEFSLKELALATNNFSSSTKVGQGGYGNHSQTLVAIKRAAEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCDEEKEQMLVYEFMPNGTLRDWISGKNEESKERQNFGMGLKIVKGAAKGILYLHTEANPPIFHRDIKTSNILLDSKFTAKVADFGLSRLAPYEEGSGTKYLSTVVKGTPGYLDPEYVLTHKFTDKSDVYSLGVVFLEILTGMQPISRGKHIVNEIKVACRSGMIYATIKSKMGLYQSDCLDKFLTLALSCCQDNPEERPSMLDVVRELEDIVAMLLESDTSYPDVTFDNSGQMVPSSSLGSNVAREDQHKYAYVSGSNLVSDVIPTIVPR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01781 689 SUPERFAMILY L domain-like 21 128 - -
Cca07g01781 689 Gene3D Phosphorylase Kinase; domain 1 333 432 - -
Cca07g01781 689 Gene3D Transferase(Phosphotransferase) domain 1 433 642 - -
Cca07g01781 689 SMART serkin_6 363 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01781 689 SUPERFAMILY Protein kinase-like (PK-like) 348 642 IPR011009 -
Cca07g01781 689 ProSiteProfiles Protein kinase domain profile. 363 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01781 689 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 58 666 - -
Cca07g01781 689 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 79 - -
Cca07g01781 689 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 58 666 - -
Cca07g01781 689 Pfam Protein kinase domain 366 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01781 689 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 16 79 - -
Cca07g01781 689 Gene3D Ribonuclease Inhibitor 16 147 IPR032675 -
Cca07g01781 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01781 Cca-Chr7 44231708 44240517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01781 20 631 Receptor kinase-like Gene Family AT5G01950 52.741 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Cca07g01781 Pkinase 8.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01781 - - ccaj:109788949 1258.05