Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01777 ATGATGCTACAATCCTACTTTACCACAATAGCAATTTTTCTTCTCCTGCTTGTGTTTCCTCGAACTAAAGCTGATCTACATTCAGAAAAGCAAGCACTCCTTGACTTTGCTGCTGCAGTTCATCATGGTCCAAAAGTGAATTGGAACTCTAGTACCTCAATCTGCACTTCATGGGCGGGAGTTACATGCAATCATGATGGTTCCCATGTGCTTTCTGTAAGGCTTCCAGGTGTTGGATTGCGAGGTTCTCTCCCACCAAACACACTTGGTAAGCTAAATGGCCTCGTTAGTCTCAGTCTTAGGTCCAACAGCTTGAGGGGGAACCTTCCAACTGATCTACTTTCACTTCCTTCTCTAAGATTTATATATCTTCAACACAACAACTTCTCAGGTGATATTCCTGATTATCTGCCACCCCGGCTTATCTTTCTTGATTTGTCCTATAACTCTTTCACAGGAAAAATTCCAGCCTCAATCCAAAATTTGACACATCTAATAGGGCTAAACCTCCAAAATAACTCTCTCACAGGAACTATTCCTGATGTTAACCTTCCTAGCCTTAAGGATTTGGACTTGAGCTTCAACTACCTGAATGGTTCTATTCCTTCAGGTCTTCGTAAGTTTCCTGCCTCCTCATTTAGAGGGAATTTGATGTTATGTGGAATACCTTTGAAGCAATGTTCTTCAGTTTATTCCCCTACTTCCACATTGTCTCCACCAACAGTTTCCAAAAGACCATATGATCTATCAAACAAGAAAATGAGCAAGGGGACAAAACTAGCGATTGTTTTGGGGGGTGTAACATTACTGTTTCTTCCAGGTCTTATAGTAATCTTCTGCTGTTTCAAGAAAAAAGTTGGTGAACAAAATGTTGCACCTACAGAGAAAGGTGAGAAGCTTAGGGAGGACTTTGGGAGTGGTGTGCAAGAACCTGAGAGAAACAGGCTGATGTTTTCCGAAGGTTGTTCTCATAGTTTTGATCTGGAGGACTTGTTGAGAGCTTCAGCTGAAGTGCTTGGGAAGGGAAGTTGTGGAACAACATATAAAGCCATCTTGGAGGATGGAACAACAGTGGTTGTGAAGAGGTTAAGAGAAGTGGCGATGGGGAAAAAGGAATTTGAACAGCAAATGGAGTTTGTCCAAAGACTTGATCATCACCCAAATGTGATTCCCCTTCGTGCTTACTACTATTCCAAAGATGAAAAACTAATGGTCTATGACTACTCAACAGCCGGCAGTTTTTCCAAGTTATTGCATGGATCGAGGGAAACTGGAAGACCTCCACTAGATTGGGATACAAGATTGAAGATCATGGTTGGAGCTGCTAGGGGCATCGCTCATATCCACTCAGCCAATGGAAGGAAACTAGTCCATGGCAATATAAAATCATCCAATGTGATTCTCTCAATAGATCTTCAAGGCTGCATATCAGATTTTGGCCTAACTCCACTAACAAGTTTCTGTGCCTCCTCCAAAAGTCCAGGCTATGGAGCACCTGAAGCTATCGAGACACGAAAATGCTCACAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTTCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGGCACGGTCATGATGAAGTGGTTGATCTTCCAAAGTGGGTCCAATCTGTAGTGAGAGAGGAGTGGACTGCTGAAGTGTTTGATCTTGAGCTTATGAGATATCCAAACATTGAAGATGAGCTTGTGCAGATGCTGCAACTGGCAATGGCATGCGTGGCAGTGATGCCTGACACGAGGCCTTCAATGGAGGAAGTTGTTAGGACAATTGAAGAAATTAGAGAATCTATTTATGAAAACTAG 1839 0.4258 MMLQSYFTTIAIFLLLLVFPRTKADLHSEKQALLDFAAAVHHGPKVNWNSSTSICTSWAGVTCNHDGSHVLSVRLPGVGLRGSLPPNTLGKLNGLVSLSLRSNSLRGNLPTDLLSLPSLRFIYLQHNNFSGDIPDYLPPRLIFLDLSYNSFTGKIPASIQNLTHLIGLNLQNNSLTGTIPDVNLPSLKDLDLSFNYLNGSIPSGLRKFPASSFRGNLMLCGIPLKQCSSVYSPTSTLSPPTVSKRPYDLSNKKMSKGTKLAIVLGGVTLLFLPGLIVIFCCFKKKVGEQNVAPTEKGEKLREDFGSGVQEPERNRLMFSEGCSHSFDLEDLLRASAEVLGKGSCGTTYKAILEDGTTVVVKRLREVAMGKKEFEQQMEFVQRLDHHPNVIPLRAYYYSKDEKLMVYDYSTAGSFSKLLHGSRETGRPPLDWDTRLKIMVGAARGIAHIHSANGRKLVHGNIKSSNVILSIDLQGCISDFGLTPLTSFCASSKSPGYGAPEAIETRKCSQKSDVYSFGVLLLEMLTGKTPVQYSGHGHDEVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEDELVQMLQLAMACVAVMPDTRPSMEEVVRTIEEIRESIYEN 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01777 612 Pfam Protein kinase domain 336 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01777 612 Gene3D Phosphorylase Kinase; domain 1 303 408 - -
Cca07g01777 612 CDD STKc_IRAK 339 605 - -
Cca07g01777 612 Gene3D Ribonuclease Inhibitor 27 138 IPR032675 -
Cca07g01777 612 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Cca07g01777 612 Gene3D Ribonuclease Inhibitor 139 229 IPR032675 -
Cca07g01777 612 SUPERFAMILY L domain-like 43 225 - -
Cca07g01777 612 SUPERFAMILY Protein kinase-like (PK-like) 337 602 IPR011009 -
Cca07g01777 612 PANTHER OS05G0588300 PROTEIN 10 609 - -
Cca07g01777 612 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Cca07g01777 612 ProSiteProfiles Protein kinase domain profile. 333 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01777 612 PANTHER OS05G0480400 PROTEIN 10 609 - -
Cca07g01777 612 Gene3D Transferase(Phosphotransferase) domain 1 410 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01777 Cca-Chr7 44160852 44164437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01777 24 611 Receptor kinase-like Gene Family AT5G58300 60.336 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca07g01777 Pkinase 2.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01777 - - gmx:100796675 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01777 07 44160852 44164437 Cca07g01777 07 44160852 44164437 ECH