Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01766 ATGAGTTCCGATGAGTTTCTCCTCCTCGAATCGGATCCTCGCCCCGTGATTCACCACCGCCGCGGCAAATCAGCTTCCCGCTCCTTcgcctccatctccgccgccgatgttgccgccgccgccgcTGAGGCCATCATCCTCGACGCCGATGTGAAAGACGGCAGCGACGTCCTCCTCTCCGACGACTACAGCTTCCACTCCGCCTTCGCCGATCCCAAGTTCCCCTGGGAATGCCCCACGCGCCACCGCTCGGTCTCGTGGGGCGCCATGGAGCTGCGTGACGCCGCGCCCTTCGAGATTTCCGGAGCCAACACCGCCGCAACCACCGCCAACAAATCCGCTAGGGTTAGACACAAGAGCGTGCAATTCGACGACGTCGCGTTACACGAGGACAGCGCCAGGTTGATCTACATCAACGACCCCAAACGCACCAACGACAAGTACGAGTTCACCGGGAACGAGATCCGCACCAGCAGATACACGTTTGTTACGTTCCTCCCTAAGAATCTGTTCATTCAGTTCCACCGTGTCGCGTATTTGTATTTCCTCGCCATTGCAGCTCTGAACCAGCTTCCTCCGCTGGCCGTGTTCGGGAGGACCGTGTCGCTCTTCCCTCTCTTGTTCGTGCTCTGCGTTACCGCCATTAAGGATGGCTACGAGGACTGGCGCCGGCACCGCTCCGATCGCAACGAGAACAACCGCGAGTCGCTTGTTCTTCAGTCCGGCGACTTCCGGTCGAAGAAGTGGAAGAGGATTCAGGCCGGCGAGGTCGTGAAGATCTTCTCCGACGAGACGATTCCGGCGGATATGGTTCTGCTTGGGACGAGTGATCAGAGTGGTCTTGCTTATATTCAGACCTTGAATTTGGATGGAGAGTCCAATTTGAAGACTAGGTATGCTCGCCAGGAGACGGCGTCGGCGGTGTCCTCGGAGGCTTGTGATGTTTTCGGTGTGATTCGATGCGAGCAGCCCAATAGGAATATTTATGAGTTCACTGCCAATATGGAGTTCAATGGGATTAAGTTTTCGCTTAGTCAGTCTAACATTGTTTTGCGTGGTTGCCAATTGAAGAACACGGATTGGATAATCGGTGTTGTGGTTTATGCAGGGCAGGAAACTAAGGCAATGCTGAACAGTGCAGCTTCTTCTTCCAAGAGAAGCAAACTGGAAGGTTATATGAACCGGGAAACCCTTTGGTTGTCGATTTTCCTTTTTATCATGTGTTTGGTTGTGGCCATTGGGATGTGTCTTTGGCTGGTGCGCCACAATAATCAGCTTGATACATTGCCTTATTATAGAAAAAGATACTTCAGCAATGGGCCGGATAATAGAAAGAAGTATAAGTATTATGGGATACCGATGGAGGCGTTTTTCTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCGATATCTCTTTACATCACCATGGAGTTGGTTCGATTGGGTCAGTCATACTTCATGATTGAAGACAAGGATATGTTTGATGCCAGCTCTGGGTCAAGGTTTCAGTGTAGATCGTTAAATATAAACGAAGACTTGGGCCAAATACGGTATGTGTTTTCAGACAAGACAGGAACACTAACAGAAAACAAAATGGAATTCCGGAGGGCTAGTGTACATGGGAAGAATTACGGGAGCTCCTTGCCTATGGTTGAGAATACAGCAGCAACAGATGTTACTCCTAAACGGAGATGGAAGCTCAAATCTGAAATTGCGGTTGATTCTGAACTGATGACAATGTTACAGAAAGACTCGCGTAGAGCAGAAAGAATTGCTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAACACTGTTATTCCTATACTTGGTGATGGTGGATTTACCAGTTGTGGAACTATTGAACTAAATGAAGATATTAGACGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTGCATATGGATATACTCTTTTTGAGCGAACATCTGGGCATATTGTTATAGACGTCAATGGTGAGAAACTCAGATTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTGCGGAAGAGAATGTCTGTTGTTATTCGGTTTCCGGACAATGTGGTAAAGGTGTTAGTCAAAGGCGCTGATACTTCAATGTTTAGCATTTTGGAAAATGGAAGTGAGACTAACAATAACATATGGCATGCAACTCAGAGCCATTTGAATGAATATTCTTCACAAGGTTTGCGCACTCTTGTAATTGCCTCCAGGGATCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCAGGTATGAAGAGGCAAGTACTTCATTGACTGACAGATCTACCAAACTGCGTCAAACAGCAGCTCTTATAGAATGCGATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAAGAGGGTGTACCAGAAGCCATTGAGGCTCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTCACCGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTTTCCTGCAAACTTCTTAGTGGAGACATGCAGCAGATTATTATAAATGGCACTTCAGAGGGGGAATGTAGAAATCTTTTGGCCGATGCTAAAGCCAAATATGGTGTGAAATCTTCAAGTGGAGGGCGTTGGAATCTGAAGCACAAAACCGAAGATGAACATGATGATCTTGATATTCTCAACGGTTCAAAGTCATTGAGCTTTCCCAAATGGAATCTTGGAAAGGAAGAAGGAACTAATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCATGTAGGGTTGTGCTGTGTTGTCGTGTTGCTCCCTTGCAAAAGGCAGGAATTGTTGATCTGATAAAGAAGCGCACAGACGATATGACACTGGCCATAGGTGATGGGGCCAATGATGTTGCAATGATCCAAAGGGCAGATGTTGGTGTAGGAATATGTGGACAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAGTTTCAGTTCATAAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGAGTCGGATATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTATTGATGTTATTTTGGTATATATTATGCACAGCTTTTTCTACAACTTCTGCGTTGACAGATTGGAGTAGTGTTTTCTATTCTGTGATATACACATCAATACCTACTATTATTGTTGGTATTCAGGACAAGGACTTGAGTCATAAGACACTCTTGCAGTATCCAAAACTGTATGGTTCAGGTTACAGGCACGAAGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACATTTGTGGACGATTGCAGTTGTTATCCTTGTAAATGTACACCTGGCTATGGACATCAACCGTTGGGTATTAATTACTCATGTTGCTATCTGGGGATCAATAATCATTACATATGGATGCATGGTGGTATTGGATTCCATACCTGTCTTTCCCAATTACTGGACTATTTATCACCTGGCAAGGTCCCCTACATATTGGATAACAATTTTGCTTATAATTATTGTGGCATTGCTCCCTCGCTTTACTTGCAAATCGGTTGTATAATTGATCAGACGAGATGCTGTAGCAGATTGCAGTGGTGTAAGACAAATGCTTGGCATCCAACACACTAA 3705 0.448 MSSDEFLLLESDPRPVIHHRRGKSASRSFASISAADVAAAAAEAIILDADVKDGSDVLLSDDYSFHSAFADPKFPWECPTRHRSVSWGAMELRDAAPFEISGANTAATTANKSARVRHKSVQFDDVALHEDSARLIYINDPKRTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKRIQAGEVVKIFSDETIPADMVLLGTSDQSGLAYIQTLNLDGESNLKTRYARQETASAVSSEACDVFGVIRCEQPNRNIYEFTANMEFNGIKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASSSKRSKLEGYMNRETLWLSIFLFIMCLVVAIGMCLWLVRHNNQLDTLPYYRKRYFSNGPDNRKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDKDMFDASSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNYGSSLPMVENTAATDVTPKRRWKLKSEIAVDSELMTMLQKDSRRAERIAAHEFFLTLAACNTVIPILGDGGFTSCGTIELNEDIRRIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMFSILENGSETNNNIWHATQSHLNEYSSQGLRTLVIASRDLSDAELEEWQSRYEEASTSLTDRSTKLRQTAALIECDLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEGECRNLLADAKAKYGVKSSSGGRWNLKHKTEDEHDDLDILNGSKSLSFPKWNLGKEEGTNAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKKRTDDMTLAIGDGANDVAMIQRADVGVGICGQEGRQAVMASDFAMGQFQFIKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGIQDKDLSHKTLLQYPKLYGSGYRHEAYNMQLFWITMIDTFVDDCSCYPCKCTPGYGHQPLGINYSCCYLGINNHYIWMHGGIGFHTCLSQLLDYLSPGKVPYILDNNFAYNYCGIAPSLYLQIGCIIDQTRCCSRLQWCKTNAWHPTH 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01766 1234 Pfam Phospholipid-translocating ATPase N-terminal 136 201 IPR032631 -
Cca07g01766 1234 Gene3D - 635 770 IPR023299 GO:0000166
Cca07g01766 1234 SUPERFAMILY HAD-like 518 1022 IPR036412 -
Cca07g01766 1234 CDD P-type_ATPase_APLT_Dnf-like 152 1127 - -
Cca07g01766 1234 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 1125 IPR023298 -
Cca07g01766 1234 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 127 1126 - -
Cca07g01766 1234 Pfam Cation transport ATPase (P-type) 625 713 - -
Cca07g01766 1234 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 946 1062 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca07g01766 1234 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 788 840 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca07g01766 1234 SFLD p-type atpase 507 1027 IPR044492 -
Cca07g01766 1234 Gene3D - 789 1016 IPR023214 -
Cca07g01766 1234 Gene3D - 209 379 - -
Cca07g01766 1234 SUPERFAMILY Calcium ATPase, transduction domain A 233 375 IPR008250 -
Cca07g01766 1234 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 150 1133 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cca07g01766 1234 Pfam Phospholipid-translocating P-type ATPase C-terminal 1004 1128 IPR032630 -
Cca07g01766 1234 Pfam E1-E2 ATPase 234 481 - -
Cca07g01766 1234 PRINTS P-type cation-transporting ATPase superfamily signature 523 537 - -
Cca07g01766 1234 PRINTS P-type cation-transporting ATPase superfamily signature 976 995 - -
Cca07g01766 1234 SFLD Haloacid Dehalogenase 507 1027 - -
Cca07g01766 1234 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 529 805 IPR023299 GO:0000166
Cca07g01766 1234 ProSitePatterns E1-E2 ATPases phosphorylation site. 525 531 IPR018303 -
Cca07g01766 1234 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 127 1126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01766 Cca-Chr7 43971902 43979317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01766 71 1125 Primary Pumps ATPases AT5G04930 55.535 0.0 1164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01766 K14802 - gmx:100812459 1945.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01766 07 43971902 43979317 Cca07g01766 07 43971902 43979317 ECH
Cca07g01766 07 43971902 43979317 Cca01g01660 01 38358335 38365752 PCT