Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01765 ATGGACAACAATAATCTTGGGTACAGTCGTAGGAAGGCAATTGAGGAACTTGTGAGAGGGCATGATCATGCCAAACAACTTAGGAGTGTCATCAATGGGAGTTGTAGTGATGATAGGTCAGCCACCCCATTTGCTGAAAAACTTGTGAAGGAGGTTCTCATGTCCTTCACCAACTCCCTCTTGTTCTTGAACAACACCACCACTTCTGAACCCCATGATGCCTCTGATGTCCAAGTTTGGGACTCTCCCAAATCTGAGGACTCTCAAGAGAGTAATTGCAAGACTTCCACCGTTAAGGAAAGAAGAGGATGCTACAAGAGAAGAAGAACTGAGCAAACATGGGAGAAGGAGTCTGAAGCTCCAATCGATGATGGCTACCAATGGAGAAAGTATGGCCAAAAAGAGATCCTCAATGCCAAATTCCCAAGGAACTACTTCAGGTGCACTCACAAATTTGATCAAGGTTGCCAAGCAACAAAACAAGTGCAAAAGGTTCAAGAGGATCCAATCCTTTTCAAGACCACATACTATGGCATCCACACTTGCAAGAACTTGTCAAACCCTGAGATCATACTTGACCCTATGTCCCCATCTACCTCTTCCAAGTTCCTTAGCTTTGACAACTCCTTCCCAACTCCATCAAACCAAGAGTGCCCCTTTTTCTCATCCTCTTTCCCATCATCAGTGGTGAAAAGGGAGTGCAAGGAGGAGGTCCCTCCTTCAACTTCCTCCAATGATTACCTCATCTCTTCTGAGCTCACTTTTGATAGCTCACCAAGGCATCATGTCACTCTTTCATCAACACTTGACTCAGAGTACAAGAGTGAGGACCTGGATGTCTTGTATGATCATGCTCACCTTGATGATGTCTTGAACCCTTCCTTGAATTTTGATAACTTCTCATGTTTTGATGTGTGA 918 0.4444 MDNNNLGYSRRKAIEELVRGHDHAKQLRSVINGSCSDDRSATPFAEKLVKEVLMSFTNSLLFLNNTTTSEPHDASDVQVWDSPKSEDSQESNCKTSTVKERRGCYKRRRTEQTWEKESEAPIDDGYQWRKYGQKEILNAKFPRNYFRCTHKFDQGCQATKQVQKVQEDPILFKTTYYGIHTCKNLSNPEIILDPMSPSTSSKFLSFDNSFPTPSNQECPFFSSSFPSSVVKRECKEEVPPSTSSNDYLISSELTFDSSPRHHVTLSSTLDSEYKSEDLDVLYDHAHLDDVLNPSLNFDNFSCFDV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01765 305 Pfam WRKY DNA -binding domain 123 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01765 305 Gene3D WRKY domain 90 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g01765 305 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 289 IPR044810 GO:0003700
Cca07g01765 305 MobiDBLite consensus disorder prediction 67 92 - -
Cca07g01765 305 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01765 305 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 289 - -
Cca07g01765 305 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca07g01765 305 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca07g01765 305 MobiDBLite consensus disorder prediction 67 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01765 Cca-Chr7 43965085 43967529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01765 1 208 WRKY Transcription Factor Family AT3G56400 39.035 4.85e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca07g01765 WRKY 4.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01765 - - gmx:100170682 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01765 07 43965085 43967529 Cca07g01765 07 43965085 43967529 ECH
Cca07g01765 07 43965085 43967529 Cca01g01657 01 38315473 38317327 PCT