Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01759 ATGATGCAATTCAGCTTGTGTGTTTTGTTTCTGATTCTCCTTGCACCGGTTATGTTGGTGTTTTCTGTGGACCCTGGTTTCAACGATGATGTGTTGGGGTTGATTGTTTTCAAGGCTGGTTTGGAGGACCCTAAAAGGAAACTCTCTTCATGGAATGAAGATGATAGCAGTCCTTGCAACTGGGAAGGCGTGAAGTGTGATCCTGCATCCAATAGGGTCACTGCTCTTGTTCTTGATGGTTTCTCTCTTTCTGGGCATGTTGATAGGGGCTTATTGAGGTTGCAGTCTCTTCAAATTCTCTCACTTTCACGGAACAACTTCACAGGGCTTATAAACCCTGATCTTCCTCGCCTAGGGAGTTTGCAGGTTGTGGACTTGAGTGACAACAACCTCTCTGGGGAGATCCCAGAAGGGTTCTTCCAACAATGTGGCTCTCTTAGGTCAGTTTCCTTTGCCAAGAACAACCTCACAGGTAAGATTCCCGAGTCCTTGAGTTCATGCTCCAATTTGGCAACTGTGAACTTCTCCTCTAACCATCTCCATGGGGAATTGCCTAATGGAGTGTGGTTCTTGAGGGGGCTGCAGTCCCTTGATCTGTCTGATAACTCTCTTGAGGGAGAGATTCCTGAAGGAATTCAGAATCTTTATGATATGAGGGAGTTGAGTCTTCAAAGAAACAGGTTTAGTGGAAGGCTTCCTGGGGACATTGGAGGTTGCATACTTATGAAATCACTTGACTTGAGTGATAATTTTCTCTCTGGGGAGCTTCCTCAGTCAATGCAAAGACTCAATTCATGTACATCACTTAGTTTGCAGGGGAATTCATTCACTGGAGTGGTTCCTGACTGGATTGGTGAATTGAAGAATCTGGAGGTGTTGGATCTTTCTCTCAATGCGTTCTCTGGTTGGATTCCAAAGTCATTGGGAAATCTGGACTCTTTGCATAGGTTGAATTTGTCGAGGAATCATTTGGCAGGAAACTTGCCTGATTCAATGGTGAACTGCACTAAGCTTGTGGCTCTTGACATCAGCCACAATCACTTGACAGGTCATGTTCCTTCATGGATTTTCAGGATGGGTGTGCAAAGTATCTCTCTTTCTGGGAATGTCTTTAGCAAGGGCAATTATCCTGCACTTAAGTCCACACCTGCTTCGTATCATGGTCTCGAGGTTTTGGATTTATCATCCAATGCTTTTTCTGGTGAGATTCCATCTGGCATTGGGGGACTTAGTAGCCTGCAAGTCTTGAATATTTCCACCAACAATATCTCTGGTTCTATTCCTATTGGTATAGGAGAACTTAAGTCTTTGTACATTATTGATCTTAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGAAGGGGCGATTTCACTCAGTGAACTAAGGCTGCAGAAGAACTTTCTAGGTGGGAGAATTCCAGCCCAAATTGACAAGTGTTCATCTCTAACATTTTTGATTCTTTCTCACAACAAGCTTACTGGTTCAATCCCTGCAGCCATTGCAAACCTCACCAATCTTCAGTATGTAGATTTGTCATGGAATGATTTCTCTGGAAGTTTACCCAAGGAGTTGACAAATCTTTCTCATCTTTTCTCATTTAATGTATCCTTCAACCACCTTGAAGGTGAACTACCTGTGGGAGGCTTCTTCAACACCATCTCCTCTGCATCAGTCTCTGGTAACCCGATGTTGTGCGGTTCGGTTGTCAACCATTCCTGTCCATCTGTTCATCCCAAACCAATTGTCTTAAACCCCAATTCTTCTGGTTCGAACTCCAGCATTTCCTCACAGCGCCATAGTCATAAGACCATACTAAGTATCTCTGCCTTTATTGCTATTGGAGCAGCTGCTTTTATTGTCATTGGTGTGGTGGCTATCACTGTCCTTAATATCCATGTGCGTTCCTCAATGGCACGCACACCTGCTCCATTTGCATTTTCTGGTGGCGAGGACTATAGCGGTTCGCCAGCAAATGATCCAAACTATGGCAAGCTTGTCACATTTTCTGGTGATACAGATTTTTCTGATGGAGCCCATAATCTACTCAATAAAGAAAGTGAAATAGGCCGTGGTGGATTTGGAGTTGTTTATCGCACTTTCCTTCGCGATGGGCATGCTGTTGCAATCAAGAAGCTCACATTCCCCAGTTTGATTAAGTCTCAAGAAGACTTTGAGAAAGAAGTTAAAAAGCTTGGGAAAATCAGGCATCCAAATCTTGTGGCACTTGAAGGTTATTATTGGACTTCATCCATGCAGCTCCTTATTTATGAGTTCCTATCCAGAGGGAGTTTGCATAAACTTCTGCATGATGATAACAGCAAAACTGCCTTCTCTTGGCCACAAAGGTTCAAGATTATTCTAGGCATGGCAAAAGGGTTGGCCCATCTGCACCAAATGAACACCATCCACTACAACCTCAAATCAACCAATGTTCTGATTGATTGTTCTGGTGAGCCAAAGGTAGGAGATTTTGGCTTGGTGAAACTACTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTCGGATACATGGCGCCAGAGTTCGCATGCCGGACGGTTAAGATAACCGAGAAATGTGACGTGTATGGTTTCGGGATCCTGGTGCTGGAGGTGGTGACGGGAAAAAGACCTGTGGAGTACATGGAGGATGATGTTGTGGTTCTTTGTGACATGGTGAGGGGTGCATTGGAGGAAGGGAAGGTGGAGCAATGTGTTGATAGGAGGCTCCTTGGTAATTTTGCTGCAGAGGAAGCAATTCCTGTGATAAAATTGGGGTTGATTTGTGCATCACAAGTGCCGTCAAACCGTCCAGATATGGCTGAGGTAGTCAACATATTAGAGTTAATCCAATGCCCTTCAGAAGGACATGAGGAATTAGAATGA 2907 0.4403 MMQFSLCVLFLILLAPVMLVFSVDPGFNDDVLGLIVFKAGLEDPKRKLSSWNEDDSSPCNWEGVKCDPASNRVTALVLDGFSLSGHVDRGLLRLQSLQILSLSRNNFTGLINPDLPRLGSLQVVDLSDNNLSGEIPEGFFQQCGSLRSVSFAKNNLTGKIPESLSSCSNLATVNFSSNHLHGELPNGVWFLRGLQSLDLSDNSLEGEIPEGIQNLYDMRELSLQRNRFSGRLPGDIGGCILMKSLDLSDNFLSGELPQSMQRLNSCTSLSLQGNSFTGVVPDWIGELKNLEVLDLSLNAFSGWIPKSLGNLDSLHRLNLSRNHLAGNLPDSMVNCTKLVALDISHNHLTGHVPSWIFRMGVQSISLSGNVFSKGNYPALKSTPASYHGLEVLDLSSNAFSGEIPSGIGGLSSLQVLNISTNNISGSIPIGIGELKSLYIIDLSDNKLNGSIPSEIEGAISLSELRLQKNFLGGRIPAQIDKCSSLTFLILSHNKLTGSIPAAIANLTNLQYVDLSWNDFSGSLPKELTNLSHLFSFNVSFNHLEGELPVGGFFNTISSASVSGNPMLCGSVVNHSCPSVHPKPIVLNPNSSGSNSSISSQRHSHKTILSISAFIAIGAAAFIVIGVVAITVLNIHVRSSMARTPAPFAFSGGEDYSGSPANDPNYGKLVTFSGDTDFSDGAHNLLNKESEIGRGGFGVVYRTFLRDGHAVAIKKLTFPSLIKSQEDFEKEVKKLGKIRHPNLVALEGYYWTSSMQLLIYEFLSRGSLHKLLHDDNSKTAFSWPQRFKIILGMAKGLAHLHQMNTIHYNLKSTNVLIDCSGEPKVGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDRRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVVNILELIQCPSEGHEELE 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01759 968 SUPERFAMILY RNI-like 245 558 - -
Cca07g01759 968 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 959 - -
Cca07g01759 968 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Cca07g01759 968 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Cca07g01759 968 ProSiteProfiles Protein kinase domain profile. 685 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01759 968 Gene3D Ribonuclease Inhibitor 242 308 IPR032675 -
Cca07g01759 968 Gene3D Ribonuclease Inhibitor 190 241 IPR032675 -
Cca07g01759 968 Gene3D Phosphorylase Kinase; domain 1 671 761 - -
Cca07g01759 968 CDD STKc_IRAK 691 957 - -
Cca07g01759 968 Pfam Leucine rich repeat 460 519 IPR001611 GO:0005515
Cca07g01759 968 Pfam Leucine rich repeat 388 447 IPR001611 GO:0005515
Cca07g01759 968 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Cca07g01759 968 Pfam Leucine rich repeat 267 324 IPR001611 GO:0005515
Cca07g01759 968 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 959 - -
Cca07g01759 968 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Cca07g01759 968 SUPERFAMILY RNI-like 72 324 - -
Cca07g01759 968 Pfam Leucine Rich repeat 334 350 IPR001611 GO:0005515
Cca07g01759 968 Pfam Protein tyrosine and serine/threonine kinase 686 894 IPR001245 GO:0004672|GO:0006468
Cca07g01759 968 SMART LRR_sd22_2 191 214 - -
Cca07g01759 968 SMART LRR_sd22_2 506 532 - -
Cca07g01759 968 SMART LRR_sd22_2 287 313 - -
Cca07g01759 968 SMART LRR_sd22_2 434 457 - -
Cca07g01759 968 SMART LRR_typ_2 336 359 IPR003591 -
Cca07g01759 968 SMART LRR_typ_2 410 434 IPR003591 -
Cca07g01759 968 SMART LRR_typ_2 118 142 IPR003591 -
Cca07g01759 968 SMART LRR_typ_2 191 214 IPR003591 -
Cca07g01759 968 SMART LRR_typ_2 530 554 IPR003591 -
Cca07g01759 968 SMART LRR_typ_2 287 310 IPR003591 -
Cca07g01759 968 SMART LRR_typ_2 311 335 IPR003591 -
Cca07g01759 968 SMART LRR_typ_2 94 113 IPR003591 -
Cca07g01759 968 SMART LRR_typ_2 506 529 IPR003591 -
Cca07g01759 968 SMART LRR_typ_2 215 239 IPR003591 -
Cca07g01759 968 Pfam Leucine Rich Repeat 194 215 IPR001611 GO:0005515
Cca07g01759 968 Gene3D Ribonuclease Inhibitor 309 582 IPR032675 -
Cca07g01759 968 SUPERFAMILY Protein kinase-like (PK-like) 686 958 IPR011009 -
Cca07g01759 968 Gene3D Transferase(Phosphotransferase) domain 1 762 966 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01759 Cca-Chr7 43884931 43889133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01759 4 967 Receptor kinase-like Gene Family AT3G56370 61.134 0.0 1139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Cca07g01759 PK_Tyr_Ser-Thr 2.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01759 - - gmx:100813535 1716.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01759 07 43884931 43889133 Cca07g01759 07 43884931 43889133 ECH
Cca07g01759 07 43884931 43889133 Cca01g02035 01 47343406 47346501 PCT