Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01741 ATGAGTTTCAGAGAGAGGGAGCTAGGAGAAGAGAGGGAATGTGAAGAATCGGTGTTGGGGAGCAATGAATCCAAATCAGTGAGGCAAAATGGGTCTTTGACAGACACAGAGCTAACAATTGATGAGAGTCTATTGGTTGACCCTAAACTACTCTATATTGGGTCCAAGATTGGTGAAGGAGCTCATGGGAAAGTGTATGAAGGAAGATTATTAATTTCCAGGTATGGAAATGAAATTGTTGCAATCAAAGTATTACATCGCGGGAGCACTTCTGAGGAAAGAGCTTCCCTTGAAAATCGTTTTGCTCGAGAAGTTAATATGATGTCTCGTGTCCACCATGACAATCTTGTTAAATTTATTGGAGCATGTAAGGATCCTCTTATGGTAATAGTTACAGAGCTATTACCAGGGATGTCGCTGCGTAAATATTTAACCAGTATCCGTCCTAAACAATTAGACCTTGATGTGGCTATAAACTTTGCCCTTGATATTGCTCGAGCCATGGATTGGCTACATGCCAATGGGATCATTCACAGAGATCTGAAACCTGACAACCTGTTGCTTACGGCAAATCAGAAGTCTGTTAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTGACCGAAATGATGACTGCAGAAACAGGAACTTACCGTTGGATGGCACCAGAGTTGTACAGTACTGTGACATTACGTCAGGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTGTATAGCTTTGGGATTGTTTTATGGGAGCTACTAACAAACCGCATGCCTTTTGAAGGGATGTCCAATTTACAAGCTGCTTATGCCGCTGCGTTTAAGCAAGAGAGGCCTAACATTCCAGATGACATATCCCCTGAACTAGCTTTTGTCATACAATCATGCTGGGTTGAAGATCCTAACATGAGACCAAGTTTTAGTCAGATCATCCGCATGCTCAATGCGTTTCTCTTCACACTCTCACCCCCATCTCCTCCGTTGCCAGTACCTAACAATGAACCTGAGGTGGCTACAACAAGTAATGGCACCATTACTGAGTTTTCTGCCCGAAACCGAGGAAAGTTTGGCTTTCTTCGCCAATTGTTTTCTTCAAAGAGGACCAGAAACTAA 1122 0.426 MSFRERELGEERECEESVLGSNESKSVRQNGSLTDTELTIDESLLVDPKLLYIGSKIGEGAHGKVYEGRLLISRYGNEIVAIKVLHRGSTSEERASLENRFAREVNMMSRVHHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKQLDLDVAINFALDIARAMDWLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPNIPDDISPELAFVIQSCWVEDPNMRPSFSQIIRMLNAFLFTLSPPSPPLPVPNNEPEVATTSNGTITEFSARNRGKFGFLRQLFSSKRTRN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01741 373 CDD STKc_MAP3K-like 57 317 - -
Cca07g01741 373 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672|GO:0006468
Cca07g01741 373 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Cca07g01741 373 PRINTS Tyrosine kinase catalytic domain signature 244 266 IPR001245 GO:0004672|GO:0006468
Cca07g01741 373 PRINTS Tyrosine kinase catalytic domain signature 288 310 IPR001245 GO:0004672|GO:0006468
Cca07g01741 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Cca07g01741 373 Gene3D Phosphorylase Kinase; domain 1 36 136 - -
Cca07g01741 373 ProSitePatterns Protein kinases ATP-binding region signature. 57 83 IPR017441 GO:0005524
Cca07g01741 373 SUPERFAMILY Protein kinase-like (PK-like) 48 342 IPR011009 -
Cca07g01741 373 PANTHER SERINE-THREONINE PROTEIN KINASE 17 346 - -
Cca07g01741 373 MobiDBLite consensus disorder prediction 1 31 - -
Cca07g01741 373 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 17 346 - -
Cca07g01741 373 Gene3D Transferase(Phosphotransferase) domain 1 138 328 - -
Cca07g01741 373 ProSiteProfiles Protein kinase domain profile. 51 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01741 373 Pfam Protein tyrosine and serine/threonine kinase 53 317 IPR001245 GO:0004672|GO:0006468
Cca07g01741 373 SMART serkin_6 51 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01741 373 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01741 Cca-Chr7 43654608 43657829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01741 39 373 MAP Kinase Kinase Kinase AT5G01850 73.816 0.0 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Cca07g01741 PK_Tyr_Ser-Thr 1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01741 - - gmx:100816708 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01741 07 43654608 43657829 Cca07g01741 07 43654608 43657829 ECH