Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01737 ATGAAGACTGTGTATAGGGCATTTGATGAGTTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCACTCACCAGAGCATCTTCAGCGCCTTTATTCAGAGGTTCATCTCCTTAAGCACCTAGACCATGAATCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAACAACAGAACCTTCAACTTCATCACTGAATTGTTCACCTCCGGCACCCTAAGAGAGTACAGGCAGAAGTATAAACGAGTAGATATCAGAGCAGTTAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTACACAGCCATAATCCTCCTGTAATACATAGAGATCTCAAGTGTGACAATATATTTGTCAATGGCCATCAGGGTAGGGTCAAAATTGGTGACTTAGGCCTGGCAGCTATACTTCGTAGCTCCCAACATGCCCACAGTGTCATAGGCACACCAGAATTCATGGCACCAGAACTGTATGAAGAGAAGTACAACGAGCTGGTAGATATATACTCCTTCGGTATGTGCATGATAGAGATGCTTACTTTTGAGTTCCCATACAGTGAGTGCGCCAACCCAGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTACCTGAAGCGTTTTACAGAATCCAAGATTTGGAAGCCCAGAAGTTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGACCATCAGCGAAGGAGCTCTTGTTGGACCCATTTTTAGCCATGGACCAACTTGAAATACCATTGCCACCAAGCATACCCTTGTGTCCAAATCAAACACTAAAGCTTAATTCCATTGCACTATTTCCCGGTGTGCATCTTGATCAAACAAAGAGCGCGGATATGACAATCACTGGCTCAATAAATGAAGAGGACAACACTGTTTTCCTTAAAGTGCGGATATCTGACAAAATGGGGCACACAAGGCACGTGTTCTTCCCATTTGACACATTAAAAGACACGGCTATACAGGTGGCGATGGAGATGGTACAAGAACTTGAGATAAGCCACTTGGAACCACTGGAGATTGCTGCAATGATAGATCATGAGGTATCAGCTCTAGTTCCAACTTGGAGGGACAGGGTTAAGTGTCACCACCAACGACAGTACAGCTTTAACTACGAAGAAGATGATGATGCCAATAACCATCATCCTTTCTTCTTATCATCTTCTCCATCATCCCCTCGCGGATCTGGCCACATGTCTGCTTCCAACTCCTTCAAGACCCGTGTTCGTGGGAACCTTTACCCATTTACTCAAGAATGGCCTCAAGATGATCAGTTTGTGAACGATGACACAAGCTCCCAAACCTCAGTGAACTCCTTCAAGTGTTCAACATTCCAATTGTGCGACCCCGGGAACGAAGACGAGCACGGGTTAACAACAGCAATAGACAGAAGCGATCAACGCAACAAGTGCACAGCATTATCATACCGTGGTGGGGAAGAATCAGCAGAAGCGAGTTTGGCGAGACAGTTTTACTACCCAACGAGAATGGAGTCGTCTCGTGGGTGCATGTTAGGGTCGAGCCACGCGTGTCCGAGGTTGACGAGGATCCGGTCGTGCCCGCATGAGCGGAGGAGCCAGCAGCTTCAGCGGTCGATGTTGGAGGAGATTTACAAGTACAAGAGGCGCTTGTTCAACACTGTTGGCGCCGTTGAGAACATCGGGTTCCGGCATCCCAATCGCAGCCTAAGCAAACGACGTCCTCGCCATTTTATCGCTTCTGAAATTCTCATTCTCTTTCATGACCGTTTTCTTCTCGCTTCTGAAACTCTCGGTTCATCTAATTCCAACGCGGTGGTGACCTTGAAcgacgtcgttgccgtcgcaatgccgatcgcgcgctgcaacagccagattccggcgccgctgccgtcgccgattccgaCCGGGAGAGGGACGCGCTCCGCCGCCACAACACCCACCGAAAATCCGCGCTACGAACCCCCATGGCCAACCCAACTTTTGTCCGAAACACACGTGGCGCCACACGAGATGCAGAATCGCAGCCTAAGCAAACGACGTCCTCGCCATTTTATCGCTTCTGAAATTCTCATTCTCTTTCATGACCGTTTTCTTCTCGCTTCTGAAACTCTCGGTTCATCTAATTCCAACGCGGTGGTGACCTTGAAcgacgtcgttgccgtcgcaatgccgatcgcgcgctgcaacagccagattccggcgccgctgccgtcgccgattccgaCCGGGAGAGGGACGCGCTCCGCCGCCAACGAGATCTTCAGCCGGTTCCTCGAGAAGAGGCTGCAGCTGCCGGAGCTGTCGCTGCCAGGACAGCACCTGCCGCCGGCGCCGGCGGAGATCGACCTCCGGTCTCTGCCGCTCGGCGCCGCCGATCTGATGCTGCGCTCCGCCAGGGAGTTCGGCGCGTTCCGGATCCGGTGCCACGGGATCTCCGGCATCGAACTTTCGACGATGGCGGACGAAGCTGAATGCGTTTTCCAGAAATCGAAGAGGCTCGTCGTCGAGCGTACCGGACCTGGCGGAGAGGTGATTCCCTGTGTCCGCTCCAGCAAAGGTGCAATGGAATTCACCGCTCAAAGGATTATCGGCGACCAAACGAATCGGAAATTTTGGATTCATATGGGGAATGTTGCAAGTAGATTGGATAGTATAGTTGAGCAAGTGATTATGGTTCTACAACATAACACATCTAAAGAGTTTAAGGAGCGGATTCAAGATACAGAGTCTGTGATTTGCTTGTGCAGGTCCAGAGAATATAGTTGTCACTGTTGGCAAACAACTACAGGAATGGAGCCACGGTGA 2817 0.4636 MKTVYRAFDELLGIEVAWNQVKLGDVFHSPEHLQRLYSEVHLLKHLDHESMMIFYGSWIDVNNRTFNFITELFTSGTLREYRQKYKRVDIRAVKNWARQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTFEFPYSECANPAQIYKKVTSGKLPEAFYRIQDLEAQKFVGKCLANVSERPSAKELLLDPFLAMDQLEIPLPPSIPLCPNQTLKLNSIALFPGVHLDQTKSADMTITGSINEEDNTVFLKVRISDKMGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAAMIDHEVSALVPTWRDRVKCHHQRQYSFNYEEDDDANNHHPFFLSSSPSSPRGSGHMSASNSFKTRVRGNLYPFTQEWPQDDQFVNDDTSSQTSVNSFKCSTFQLCDPGNEDEHGLTTAIDRSDQRNKCTALSYRGGEESAEASLARQFYYPTRMESSRGCMLGSSHACPRLTRIRSCPHERRSQQLQRSMLEEIYKYKRRLFNTVGAVENIGFRHPNRSLSKRRPRHFIASEILILFHDRFLLASETLGSSNSNAVVTLNDVVAVAMPIARCNSQIPAPLPSPIPTGRGTRSAATTPTENPRYEPPWPTQLLSETHVAPHEMQNRSLSKRRPRHFIASEILILFHDRFLLASETLGSSNSNAVVTLNDVVAVAMPIARCNSQIPAPLPSPIPTGRGTRSAANEIFSRFLEKRLQLPELSLPGQHLPPAPAEIDLRSLPLGAADLMLRSAREFGAFRIRCHGISGIELSTMADEAECVFQKSKRLVVERTGPGGEVIPCVRSSKGAMEFTAQRIIGDQTNRKFWIHMGNVASRLDSIVEQVIMVLQHNTSKEFKERIQDTESVICLCRSREYSCHCWQTTTGMEPR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01737 938 Pfam Protein kinase domain 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01737 938 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01737 938 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
Cca07g01737 938 PANTHER WNK KINASE 1 571 - -
Cca07g01737 938 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g01737 938 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 571 - -
Cca07g01737 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Cca07g01737 938 Gene3D Transferase(Phosphotransferase) domain 1 73 253 - -
Cca07g01737 938 MobiDBLite consensus disorder prediction 391 413 - -
Cca07g01737 938 CDD STKc_WNK 2 248 - -
Cca07g01737 938 SUPERFAMILY Protein kinase-like (PK-like) 3 269 IPR011009 -
Cca07g01737 938 MobiDBLite consensus disorder prediction 392 413 - -
Cca07g01737 938 MobiDBLite consensus disorder prediction 633 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01737 Cca-Chr7 43568380 43578045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01737 1 387 MAP Kinase Kinase Kinase AT3G51630 67.430 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Cca07g01737 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01737 K08867 - gmx:100272206 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01737 07 43568380 43578045 Cca07g01737 07 43568380 43578045 ECH
Cca07g01737 07 43568380 43578045 Cca01g02009 01 46933435 46938517 PCT