Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01736 ATGGGTAACTACAAGTTCAAATTATCAGATATGATCCCAAATGCTTGGTTTTACAAACTCAAGGACATGGGAAAAGCAAGAAAGCAAACCTCAACTCAGCCCAGGAAGAAAAAACAACCTTCACAAGCCTCGACCACACAACCATCAAAACCAAAGCAACCCCACCAATACAATCCCAGAAAGTCTTACTACTTCACAAGGGAACTTAACCCCAATGACAGAATCTACACCTCACCAGCCAACAACCGAAACCTCAAAGACACCAATTCCCCTGAACCCCCAAGAAAATCATCCAAACAAAGACTCAAGAGAAGAACTGCAAGGACTTCTAGTTCTAGTTCTTCTCCTAAGCATATTGTTGCCACCAACAATAACAACTCCTCATCACCACCACATCATAGCTCTCCTGAATCAGAGTACCCTGACCCTGAATTCAGAACAGACCGTGTTCTTACCACTGAATCACTGGATGAAAAAACCATTCCTTGGTCCAACTCTTGTGCCTGCAGGCTACACCCCGACACCAAGGACATCATCATTGATGTGGACAACAATTCCATAGCCAGAAAAGATGATAAGCTAGAAGGGTATGAGTATGATTCCTTATCAGACCTTGTGCTTCCACCAATTGTGACCAAGCCAGAAAAATTCAATGACTTGCTCAGTGCTGCCAAGAAGAAAGAATCCAAACCAAGAAGCAAAATGGTTGCACATGAAGAACCAAACCTGCAGGGTCCTCTAAGAGTTAAAATTGTGAAGGAACACAAGAACACACCTAGTAGGAGGTTCTCTGTGAGCTCTCCAGGAGTGAGGCTTCGGATGAACTCACCAAGAATTGCCAGCCGGAAAATTTCGGCACAAGGCCGGAGAAGCGTGTCGGCGGCCGCGGCCGGCCGGAGAAGCCTCTCTGATAGCTTTGCAATTGTGAAGTCATCACTGAATCCTCAGAGAGACTTCAGAGAATCAATGGTGGAGATGATTGTGCAGAACAACATTAGGACATCAAAGGATTTGGAGGATCTTCTTGCTTGCTACCTTTCTCTTAATTCAGATGAGTATCATGATCTCATTATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATTAG 1116 0.4391 MGNYKFKLSDMIPNAWFYKLKDMGKARKQTSTQPRKKKQPSQASTTQPSKPKQPHQYNPRKSYYFTRELNPNDRIYTSPANNRNLKDTNSPEPPRKSSKQRLKRRTARTSSSSSSPKHIVATNNNNSSSPPHHSSPESEYPDPEFRTDRVLTTESLDEKTIPWSNSCACRLHPDTKDIIIDVDNNSIARKDDKLEGYEYDSLSDLVLPPIVTKPEKFNDLLSAAKKKESKPRSKMVAHEEPNLQGPLRVKIVKEHKNTPSRRFSVSSPGVRLRMNSPRIASRKISAQGRRSVSAAAAGRRSLSDSFAIVKSSLNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01736 371 MobiDBLite consensus disorder prediction 25 144 - -
Cca07g01736 371 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 371 IPR038933 GO:0045892
Cca07g01736 371 Pfam Transcriptional repressor, ovate 312 368 IPR006458 -
Cca07g01736 371 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 371 - -
Cca07g01736 371 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Cca07g01736 371 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 307 369 IPR006458 -
Cca07g01736 371 MobiDBLite consensus disorder prediction 35 88 - -
Cca07g01736 371 MobiDBLite consensus disorder prediction 107 135 - -
Cca07g01736 371 ProSiteProfiles OVATE domain profile. 308 367 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01736 Cca-Chr7 43546592 43547976 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Cca07g01736 Ovate 2.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01736 - - gmx:100817790 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01736 07 43546592 43547976 Cca07g01736 07 43546592 43547976 ECH